Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625425
Identifier: 84625425
GI number: 84625425
Start: 4260609
End: 4260845
Strand: Reverse
Name: 84625425
Synonym: XOO_3768
Alternate gene names: NA
Gene position: 4260845-4260609 (Counterclockwise)
Preceding gene: 84625426
Following gene: 84625424
Centisome position: 86.25
GC content: 67.93
Gene sequence:
>237_bases ATGAGCATCATGTCCCGACCGTCTGTTCGTCTCGCACTGGTTGGTGCGACCTTTGTCCTGCTTGCCGCCTGTGGCAACAA GGGCCCGCTGGTCATGCCGCAGAAGCCGGTGCCGGTGGAAGCCCAGCCCGTGCCGCAGCCGGTGGAAGAGTCCACGCCTG CGCCCGTCCCCGCGGACAGCAGCACCAAGCCCGCCCCCACCACAGACCAGCCCGCTAGCAGCGGCAATGAGCGCTGA
Upstream 100 bases:
>100_bases GCGCCCCGAACCGCCGCCGCGCCCGCTGCCCGCCGCGCACTGAACACCGCAAGTGCATCGGGCGCACGGCCGTAACGGTG TTCTGGCTATACTTCGGCCC
Downstream 100 bases:
>100_bases CGGTCGCAGCGGGCGTCTGCGTTTCACCAAAATGCACGGCGCCGGCAACGATTTCGTGGTACTGGACCTGCGCGACGGCA CGCCGCCGCCAGATGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSIMSRPSVRLALVGATFVLLAACGNKGPLVMPQKPVPVEAQPVPQPVEESTPAPVPADSSTKPAPTTDQPASSGNER
Sequences:
>Translated_78_residues MSIMSRPSVRLALVGATFVLLAACGNKGPLVMPQKPVPVEAQPVPQPVEESTPAPVPADSSTKPAPTTDQPASSGNER >Mature_77_residues SIMSRPSVRLALVGATFVLLAACGNKGPLVMPQKPVPVEAQPVPQPVEESTPAPVPADSSTKPAPTTDQPASSGNER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8003; Mature: 7872
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIMSRPSVRLALVGATFVLLAACGNKGPLVMPQKPVPVEAQPVPQPVEESTPAPVPADS CCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC STKPAPTTDQPASSGNER CCCCCCCCCCCCCCCCCC >Mature Secondary Structure SIMSRPSVRLALVGATFVLLAACGNKGPLVMPQKPVPVEAQPVPQPVEESTPAPVPADS CCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC STKPAPTTDQPASSGNER CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA