Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is ybaN [C]
Identifier: 84625426
GI number: 84625426
Start: 4260903
End: 4261301
Strand: Reverse
Name: ybaN [C]
Synonym: XOO_3769
Alternate gene names: 84625426
Gene position: 4261301-4260903 (Counterclockwise)
Preceding gene: 84625427
Following gene: 84625425
Centisome position: 86.26
GC content: 67.17
Gene sequence:
>399_bases ATGACGCGACCGACTCGCTTCCGCTGGGTCTGGTGGTTGCTGGCCTACGCCAGCCTGGCTACCGGCATCGTGGGGATTTT CGTGCCCGGTCTGCCCACCACGGTGCTCATCCTGATCTCCGCCTGGGCCGCCTCACATGGCTCCGAGCGTCTGCATTATT GGCTGCTGTCGCACCCGCGCTTCGGCCCGGCGATTGTGGAATGGCAGACCTACCGTGCGGTCAGCCGCAAGGCCAAGTGG ATGGCGACGCTGACCATGAGCATCTGTGCCGCGATCATGCTGTGGTGCGTGCCGGTGTTCTGGGTCAAGTGCCTGTCGAT CGGCAGCATGGCCGTGGTGGCGATCTGGCTGTGGCTGCGCCCCGAACCGCCGCCGCGCCCGCTGCCCGCCGCGCACTGA
Upstream 100 bases:
>100_bases CCCACAGCGCGGCACGCATCGCCGCTGCAGGGCCGCTGACCAAACCCCATCGCTGGCCGTATCATTTGTGCATGACGCGA CCGACTCGCTTCCGCTGTGC
Downstream 100 bases:
>100_bases ACACCGCAAGTGCATCGGGCGCACGGCCGTAACGGTGTTCTGGCTATACTTCGGCCCATGAGCATCATGTCCCGACCGTC TGTTCGTCTCGCACTGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTRPTRFRWVWWLLAYASLATGIVGIFVPGLPTTVLILISAWAASHGSERLHYWLLSHPRFGPAIVEWQTYRAVSRKAKW MATLTMSICAAIMLWCVPVFWVKCLSIGSMAVVAIWLWLRPEPPPRPLPAAH
Sequences:
>Translated_132_residues MTRPTRFRWVWWLLAYASLATGIVGIFVPGLPTTVLILISAWAASHGSERLHYWLLSHPRFGPAIVEWQTYRAVSRKAKW MATLTMSICAAIMLWCVPVFWVKCLSIGSMAVVAIWLWLRPEPPPRPLPAAH >Mature_131_residues TRPTRFRWVWWLLAYASLATGIVGIFVPGLPTTVLILISAWAASHGSERLHYWLLSHPRFGPAIVEWQTYRAVSRKAKWM ATLTMSICAAIMLWCVPVFWVKCLSIGSMAVVAIWLWLRPEPPPRPLPAAH
Specific function: Unknown
COG id: COG2832
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786674, Length=109, Percent_Identity=33.0275229357798, Blast_Score=61, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15008; Mature: 14877
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPTRFRWVWWLLAYASLATGIVGIFVPGLPTTVLILISAWAASHGSERLHYWLLSHPR CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC FGPAIVEWQTYRAVSRKAKWMATLTMSICAAIMLWCVPVFWVKCLSIGSMAVVAIWLWLR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC PEPPPRPLPAAH CCCCCCCCCCCC >Mature Secondary Structure TRPTRFRWVWWLLAYASLATGIVGIFVPGLPTTVLILISAWAASHGSERLHYWLLSHPR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC FGPAIVEWQTYRAVSRKAKWMATLTMSICAAIMLWCVPVFWVKCLSIGSMAVVAIWLWLR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC PEPPPRPLPAAH CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA