Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is insI1 [C]

Identifier: 84625340

GI number: 84625340

Start: 4158847

End: 4159260

Strand: Reverse

Name: insI1 [C]

Synonym: XOO_3683

Alternate gene names: 84625340

Gene position: 4159260-4158847 (Counterclockwise)

Preceding gene: 84625341

Following gene: 84625339

Centisome position: 84.19

GC content: 58.94

Gene sequence:

>414_bases
ATGACCGAACGCCGCAGTCGTCTGCATCTGCTGGCTTACTCCCCCGACGGCACCGCCGAGAACGTGCGCAACGCCATTGT
CCAGCGACTGGGCGGCCTGCGCCATACAGTTCACACGCTCACCGCCGACAACGGCAAGGAGTTCGCCGATCATCGGCTCA
TTGCCGCCTGCTTGCAGAGCGATTTCTATTTCGCAGATCCGTACTGCGCATGGCAGCGCGGCAGCAACGAGAATGCCAAC
GGGTTGACACGCCAATACTTGCCACGACAGACCGATTTCAGCACCATCACCAATGCGCACCTGCGATGGATCGAGCAGCG
GCTCTACAATCGTCCGCGCAAGATACTTGGATTCAAAACGCCCCTCGAAGTCTTCTCCGAGGAGGTCCTCAACAGCGTTG
CGAATCAGAGTTGA

Upstream 100 bases:

>100_bases
TGGACACAGCGCCCCAGTGTGGTTGAGCAGCGAAGCCGTATCGGCGACTGGGAGCTGGAGACCATCAGGGCCTCGCACCG
GAAAGGGTTTGGTGTTCAGC

Downstream 100 bases:

>100_bases
ATTCGCCGACCTTCCCTAGCTCGCTGCAATAACGCCATTATCAGCGCTCTCATACCCCTGTCGTCTCTATTACACATCGG
GATACCTGATTAGCCCCGAC

Product: IS1112 transposase

Products: NA

Alternate protein names: Transposon TN4551 [H]

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHTVHTLTADNGKEFADHRLIAACLQSDFYFADPYCAWQRGSNENAN
GLTRQYLPRQTDFSTITNAHLRWIEQRLYNRPRKILGFKTPLEVFSEEVLNSVANQS

Sequences:

>Translated_137_residues
MTERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHTVHTLTADNGKEFADHRLIAACLQSDFYFADPYCAWQRGSNENAN
GLTRQYLPRQTDFSTITNAHLRWIEQRLYNRPRKILGFKTPLEVFSEEVLNSVANQS
>Mature_136_residues
TERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHTVHTLTADNGKEFADHRLIAACLQSDFYFADPYCAWQRGSNENANG
LTRQYLPRQTDFSTITNAHLRWIEQRLYNRPRKILGFKTPLEVFSEEVLNSVANQS

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=130, Percent_Identity=36.1538461538462, Blast_Score=86, Evalue=8e-19,
Organism=Escherichia coli, GI1790736, Length=130, Percent_Identity=36.1538461538462, Blast_Score=85, Evalue=1e-18,
Organism=Escherichia coli, GI1787671, Length=130, Percent_Identity=36.1538461538462, Blast_Score=85, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 15749; Mature: 15618

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHTVHTLTADNGKEFADHRLIAACLQS
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHC
DFYFADPYCAWQRGSNENANGLTRQYLPRQTDFSTITNAHLRWIEQRLYNRPRKILGFKT
CCCCCCCCHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCC
PLEVFSEEVLNSVANQS
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHTVHTLTADNGKEFADHRLIAACLQS
CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHC
DFYFADPYCAWQRGSNENANGLTRQYLPRQTDFSTITNAHLRWIEQRLYNRPRKILGFKT
CCCCCCCCHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCC
PLEVFSEEVLNSVANQS
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2820936 [H]