Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84625240
Identifier: 84625240
GI number: 84625240
Start: 4053802
End: 4054359
Strand: Reverse
Name: 84625240
Synonym: XOO_3583
Alternate gene names: NA
Gene position: 4054359-4053802 (Counterclockwise)
Preceding gene: 84625241
Following gene: 84625239
Centisome position: 82.07
GC content: 64.16
Gene sequence:
>558_bases ATGTCGATCGTCCTGACCCAGTTCGCCCGCACCCGCCTGTTCCCGCGCGATGGCCGTCGCAATGCCATCCAGGACTGCAC GCCCGAGCAGTTCATCCAGCGGCTCAACGAGGAGACACCGCTTCGCGTGATCGAGGGCTACGCGCCGTTTTGCCAGCTGC ATGTGCATCGCAACTGGACCTCCACCCGCTGCCTCACTGTCCCCATCACCGATGACAACCGGCACCTGCTGCGTTCCGGC TACGAGGCGCGCAGTTCGCAGGAATTGCCCGTGCTGGTGCGTTGGTTCGAAGGTGTCGAGCCACCGGTGGCCGCCTATCT GCTGCCCATCCTCTACAGCCGCGATCAGCTGGCCAAGGAAGGCACGCCCATCGAGTCAGACTGGGGTGTGGTCGGTTGTC TCTACACCGCAGAGCCGGACGAAATTCCGATGGCACCGATCACCATGTTGCGCAATGCCTTGGGCGTGGAAGAGGGCGGC TCGGGCACGCCGCTGGACCGCGATGCCTATCGGCGTAGCGTTGCGTTCTGGGAGCGCAATGCCAATTGGCGTGGGTGA
Upstream 100 bases:
>100_bases GCCTGCTTGCCCGCCGCGCATTGGCTGAGGTGTCGCGCAACGTCGTCGCAGCCCAGCCTGCGCGCTACCCTGACGCTCTT TGTCGCCGCGCAGCCCGCTT
Downstream 100 bases:
>100_bases GTGTGTCGCTCCGGTTCGCGTTGTTGTCCGCCAATTAAATTGCGCGTGGCATGTGTAGTTGCCGCATCCATCCTGACTGC CCGTGCTGGGACGTACGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSIVLTQFARTRLFPRDGRRNAIQDCTPEQFIQRLNEETPLRVIEGYAPFCQLHVHRNWTSTRCLTVPITDDNRHLLRSG YEARSSQELPVLVRWFEGVEPPVAAYLLPILYSRDQLAKEGTPIESDWGVVGCLYTAEPDEIPMAPITMLRNALGVEEGG SGTPLDRDAYRRSVAFWERNANWRG
Sequences:
>Translated_185_residues MSIVLTQFARTRLFPRDGRRNAIQDCTPEQFIQRLNEETPLRVIEGYAPFCQLHVHRNWTSTRCLTVPITDDNRHLLRSG YEARSSQELPVLVRWFEGVEPPVAAYLLPILYSRDQLAKEGTPIESDWGVVGCLYTAEPDEIPMAPITMLRNALGVEEGG SGTPLDRDAYRRSVAFWERNANWRG >Mature_184_residues SIVLTQFARTRLFPRDGRRNAIQDCTPEQFIQRLNEETPLRVIEGYAPFCQLHVHRNWTSTRCLTVPITDDNRHLLRSGY EARSSQELPVLVRWFEGVEPPVAAYLLPILYSRDQLAKEGTPIESDWGVVGCLYTAEPDEIPMAPITMLRNALGVEEGGS GTPLDRDAYRRSVAFWERNANWRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21159; Mature: 21028
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVLTQFARTRLFPRDGRRNAIQDCTPEQFIQRLNEETPLRVIEGYAPFCQLHVHRNWT CCEEHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCC STRCLTVPITDDNRHLLRSGYEARSSQELPVLVRWFEGVEPPVAAYLLPILYSRDQLAKE CCEEEEEEECCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHC GTPIESDWGVVGCLYTAEPDEIPMAPITMLRNALGVEEGGSGTPLDRDAYRRSVAFWERN CCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC ANWRG CCCCC >Mature Secondary Structure SIVLTQFARTRLFPRDGRRNAIQDCTPEQFIQRLNEETPLRVIEGYAPFCQLHVHRNWT CEEHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCC STRCLTVPITDDNRHLLRSGYEARSSQELPVLVRWFEGVEPPVAAYLLPILYSRDQLAKE CCEEEEEEECCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHC GTPIESDWGVVGCLYTAEPDEIPMAPITMLRNALGVEEGGSGTPLDRDAYRRSVAFWERN CCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC ANWRG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA