Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is yaiL [H]

Identifier: 84625241

GI number: 84625241

Start: 4054588

End: 4055133

Strand: Reverse

Name: yaiL [H]

Synonym: XOO_3584

Alternate gene names: 84625241

Gene position: 4055133-4054588 (Counterclockwise)

Preceding gene: 84625243

Following gene: 84625240

Centisome position: 82.08

GC content: 63.92

Gene sequence:

>546_bases
ATGCGCAATCCATTGCAAGAACAGCTGCTTAAGGCCGGCTTGGTGAAAAAAGCCCAGGTGGACAAGGTTGCGCGCGAACA
GGTCAAGCAGCGCCATGCCAAGGGCGCGGCGGTGCCGCCGGCAGATGTGGACAAGGTCGATGCGGCACGCTTGCAGGCCG
AGCGTGCTGAGCGCGATCGCGCACTGGCCGAAGAACGCAACGTGCAGGTGCGCCGGCAGGAAGTGCTGGCCCAGGTGCGG
CAGATCGTGGAGACCAACAAGGTCAAGCGTGAAGGCGAGATCGACTACCGCTTCAACGATGGCAGTGTCATCCGCAGCGT
GCTGGTGAACCCCACGCTGCGCAGCCAGTTGGCCAGCGGCGCGCTGGTGATCGTGCGTCACGGCGATGGCTTCGAGCTGA
TTCCGCGCGCGGCGGCCGACAAGGTCTATAGCCGCGATGCCGATACCGTTGTGCTTGATCACGGGCGCAACAGCGCGCCG
GCCGCGGCCGATAGCGATGACGACTACTACAGCCAGTTCAAGGTGCCGGACGATCTGATCTGGTAG

Upstream 100 bases:

>100_bases
CGGCTCCGACAAACGGCGATGCCAGCGGTCTGACCAGGCCGCGACGGGCGATGGCGCCAGCCGCGTTAAACTAGCGGCCA
GTCCACTGCCTGGCCTCCCG

Downstream 100 bases:

>100_bases
CGCTGACGGGCTACTGCAGATACGGATCTCCCCGCACCGTGTTCGCGTCATCGCGACGTGGTGCGCCCCTGCACGTTAGC
GGCGAGCATTCTGCGACTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MRNPLQEQLLKAGLVKKAQVDKVAREQVKQRHAKGAAVPPADVDKVDAARLQAERAERDRALAEERNVQVRRQEVLAQVR
QIVETNKVKREGEIDYRFNDGSVIRSVLVNPTLRSQLASGALVIVRHGDGFELIPRAAADKVYSRDADTVVLDHGRNSAP
AAADSDDDYYSQFKVPDDLIW

Sequences:

>Translated_181_residues
MRNPLQEQLLKAGLVKKAQVDKVAREQVKQRHAKGAAVPPADVDKVDAARLQAERAERDRALAEERNVQVRRQEVLAQVR
QIVETNKVKREGEIDYRFNDGSVIRSVLVNPTLRSQLASGALVIVRHGDGFELIPRAAADKVYSRDADTVVLDHGRNSAP
AAADSDDDYYSQFKVPDDLIW
>Mature_181_residues
MRNPLQEQLLKAGLVKKAQVDKVAREQVKQRHAKGAAVPPADVDKVDAARLQAERAERDRALAEERNVQVRRQEVLAQVR
QIVETNKVKREGEIDYRFNDGSVIRSVLVNPTLRSQLASGALVIVRHGDGFELIPRAAADKVYSRDADTVVLDHGRNSAP
AAADSDDDYYSQFKVPDDLIW

Specific function: Unknown

COG id: COG3122

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081724, Length=190, Percent_Identity=38.4210526315789, Blast_Score=106, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018636 [H]

Pfam domain/function: PF09831 DUF2058 [H]

EC number: NA

Molecular weight: Translated: 20219; Mature: 20219

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNPLQEQLLKAGLVKKAQVDKVAREQVKQRHAKGAAVPPADVDKVDAARLQAERAERDR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
ALAEERNVQVRRQEVLAQVRQIVETNKVKREGEIDYRFNDGSVIRSVLVNPTLRSQLASG
HHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCHHHHHHHCCC
ALVIVRHGDGFELIPRAAADKVYSRDADTVVLDHGRNSAPAAADSDDDYYSQFKVPDDLI
CEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCHHCC
W
C
>Mature Secondary Structure
MRNPLQEQLLKAGLVKKAQVDKVAREQVKQRHAKGAAVPPADVDKVDAARLQAERAERDR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
ALAEERNVQVRRQEVLAQVRQIVETNKVKREGEIDYRFNDGSVIRSVLVNPTLRSQLASG
HHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCHHHHHHHCCC
ALVIVRHGDGFELIPRAAADKVYSRDADTVVLDHGRNSAPAAADSDDDYYSQFKVPDDLI
CEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCHHCC
W
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]