Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is lptG [H]

Identifier: 84622419

GI number: 84622419

Start: 820495

End: 821601

Strand: Direct

Name: lptG [H]

Synonym: XOO_0762

Alternate gene names: 84622419

Gene position: 820495-821601 (Clockwise)

Preceding gene: 84622418

Following gene: 84622421

Centisome position: 16.61

GC content: 63.32

Gene sequence:

>1107_bases
ATGAAGCTGACGCCGCGGGTCCATGATTGGTATGTCGGCCGGGTGGTGCTGTCCACCGTGCTGCTGACGTGGGCGGTGCT
GTTGGGGCTTGACCTGGTCAACGCCTTTGCCAGCGAAGCCAAGGACATTGGTCAGGGCAGTTACACCTTTGGCCATGCGG
TGGCTTACGTGGCCTACACCGTGCCGCGCCGGGCCTACACCTTGTTCCCCACTGCAGCGGTGATTGGCGCGCTGATGGGC
CTGGGCCAGTTGGCCGCCACCTCCGAGCTGACCGCGCTGCGCGCGTTGGGCGTGTCGCGCAAACGCATGTCCGCCTCGGT
AGTCGCAGCGATGGCGCTGCTGACCGCCAGCATGGTGATCAGTGGCGAAACCATCGGGCCGTGGGCACAGAACCAGGCCG
ACACGCTCAAGGCCAGTGCCCGCTACAACAGCGATATGGCCGCTTCGCTCTATGCCGGCCTGTGGGCACGTGAGGGCGAC
ACCTTTCTTAACGCCTTGAGTGGTGAAGAGAAGTTGCTCGACGGCGGCGATACCGCACTGGATCTGCACGATGTGCGGCT
GTATCACCTCGACTCCAGCGGCAGAATGCAGCAGCTGACCTATGCGTCGGTGGCCGAACATCGCGATGGCCGTTGGACTC
TGCGCCAGGTACGTCGCGACACCTTCCAGGAACGCTCGGTGCAGCGCGAAACCTTCCCCGAGTTGCCGTGGCAATCGCAA
CTGAATCCGGCAGCGCTGGCCGCTGGCCTCGCCAAGCCGCGCAATCTGTCCGCTCATGATCTGGAGCAGAGCATCGAATA
CCGCAGCCGCAATGGATTGGATGCGCGCGATTACGAAGATCAGTACTGGAGCCGTTGGTTCTATCCGCTCAACGTGCTGG
CGCTGTGCATGGCGGCAATCCCGTTCTCGTTCGGTTCGCTGCGGAGCGGTGGCTTGGGCAAGCGTCTGTTCCTGGGCATC
CTGTTCGCGCTGGGCTTCTGGCTGCTGCAGCTGTTTTTCGGCCGCATGGCCGGCGCGCTCAAGCTCGATTACCGCATCGC
CTATGCGCTACCGCCGATGGTGATGCTGGGTGTATCGGCGTGGTTGTTCCGCAGGCGTAGTAGCTGA

Upstream 100 bases:

>100_bases
CGGCCGCGCTGGGCCTGTGGTGGCTGACGCTGCCGCTGCTGGCAGTGGCGGTGTGGGCGTATGCGCGCGATGGCCGCGTG
CGTCGGCCGAGGGCGCGCGC

Downstream 100 bases:

>100_bases
CCGCATGCGGCGGGTGAGCATGGTGGGAGTGGCGCTCTGCCTGCTGTATCTGGCGGCGACTGCGTTTTGCGTGTGGGGAG
CGCTTAGTGCACAGGGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKLTPRVHDWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKDIGQGSYTFGHAVAYVAYTVPRRAYTLFPTAAVIGALMG
LGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGPWAQNQADTLKASARYNSDMAASLYAGLWAREGD
TFLNALSGEEKLLDGGDTALDLHDVRLYHLDSSGRMQQLTYASVAEHRDGRWTLRQVRRDTFQERSVQRETFPELPWQSQ
LNPAALAAGLAKPRNLSAHDLEQSIEYRSRNGLDARDYEDQYWSRWFYPLNVLALCMAAIPFSFGSLRSGGLGKRLFLGI
LFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSAWLFRRRSS

Sequences:

>Translated_368_residues
MKLTPRVHDWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKDIGQGSYTFGHAVAYVAYTVPRRAYTLFPTAAVIGALMG
LGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGPWAQNQADTLKASARYNSDMAASLYAGLWAREGD
TFLNALSGEEKLLDGGDTALDLHDVRLYHLDSSGRMQQLTYASVAEHRDGRWTLRQVRRDTFQERSVQRETFPELPWQSQ
LNPAALAAGLAKPRNLSAHDLEQSIEYRSRNGLDARDYEDQYWSRWFYPLNVLALCMAAIPFSFGSLRSGGLGKRLFLGI
LFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSAWLFRRRSS
>Mature_368_residues
MKLTPRVHDWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKDIGQGSYTFGHAVAYVAYTVPRRAYTLFPTAAVIGALMG
LGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGPWAQNQADTLKASARYNSDMAASLYAGLWAREGD
TFLNALSGEEKLLDGGDTALDLHDVRLYHLDSSGRMQQLTYASVAEHRDGRWTLRQVRRDTFQERSVQRETFPELPWQSQ
LNPAALAAGLAKPRNLSAHDLEQSIEYRSRNGLDARDYEDQYWSRWFYPLNVLALCMAAIPFSFGSLRSGGLGKRLFLGI
LFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSAWLFRRRSS

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI87082400, Length=369, Percent_Identity=31.7073170731707, Blast_Score=150, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 40759; Mature: 40759

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTPRVHDWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKDIGQGSYTFGHAVAYVAYT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VPRRAYTLFPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVI
CCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SGETIGPWAQNQADTLKASARYNSDMAASLYAGLWAREGDTFLNALSGEEKLLDGGDTAL
CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHCCCCCCEE
DLHDVRLYHLDSSGRMQQLTYASVAEHRDGRWTLRQVRRDTFQERSVQRETFPELPWQSQ
EEEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LNPAALAAGLAKPRNLSAHDLEQSIEYRSRNGLDARDYEDQYWSRWFYPLNVLALCMAAI
CCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PFSFGSLRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCHHHHHHHHH
WLFRRRSS
HHHHHCCC
>Mature Secondary Structure
MKLTPRVHDWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKDIGQGSYTFGHAVAYVAYT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VPRRAYTLFPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVI
CCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SGETIGPWAQNQADTLKASARYNSDMAASLYAGLWAREGDTFLNALSGEEKLLDGGDTAL
CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHCCCCCCEE
DLHDVRLYHLDSSGRMQQLTYASVAEHRDGRWTLRQVRRDTFQERSVQRETFPELPWQSQ
EEEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LNPAALAAGLAKPRNLSAHDLEQSIEYRSRNGLDARDYEDQYWSRWFYPLNVLALCMAAI
CCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PFSFGSLRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCHHHHHHHHH
WLFRRRSS
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]