Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is pssA [H]
Identifier: 84622396
GI number: 84622396
Start: 797015
End: 797788
Strand: Direct
Name: pssA [H]
Synonym: XOO_0739
Alternate gene names: 84622396
Gene position: 797015-797788 (Clockwise)
Preceding gene: 84622392
Following gene: 84622397
Centisome position: 16.13
GC content: 64.08
Gene sequence:
>774_bases ATGGATGAGATGAGACCGCCCCCGCGCTCGCGCACGATTTACCTGCTGCCGAACCTGTTCACCACTGCCGGGCTGTTTTC CGGTTTCTACGCGATCATCGCCGCCGCCAATGGGCAGTTCGTCCAGGCCGCCATGGCGGTGTTCGTGGCTGCGGTGATGG ACGGGCTGGATGGTCGGGTTGCGCGCCTGACCAATACCAGCAGCGAATTCGGCGTGCAGTACGACTCGCTGGCCGATCTG GTCAGCTTCGGCATGGCCCCGGCGCTGGTGATGTACCACTGGTCGCTGTCGGCGCTGAAGTACGACAGCAATGTGATGGG CCGGGTCGGTTGGTCGGCTGCCTTCCTGTATGCGGCCTGCGCCGCGTTGCGGCTGGCACGTTTTAATACCCAGGTCGGCG TGGTCGACAAGCGCTGGTTCATTGGTCTGGCGAGTCCCGCGGCGGCTGGGCTGATGATGTCCTTCGTGTGGGCGTTTGCG GACGACAGCCTGGGGTTCGATGGCGAGCAGCTGCGCTATGTGGCGTTGGCGATCACGGTGGTCTCGGCATTGTTGATGGT CAGCCGGATGCGCTTCTGGAGCTTCAAGGGTGGTGCCCGTGGTCCACGTGCCGACCGCGTGCCATTCCTGGCGTTGGCGA TCGCCACGGTGGTGATTGCGCTATTGGTGATCGACCTGGCGCGCTCCTTTCTGGTGATCGGCGTGCTGTATGCCTTGTCT GGCCCGCTGATGTGGCTGTGGCGACGTTGGCGGCGCGTGCCAGAGCTGCCATGA
Upstream 100 bases:
>100_bases TGCAGCATCCACGGCCGGCGCTGGCAAGTGATGGGCGCGCAGGGTGCTGAACCAGCAAGCGCGCTACCGCCGGACTGACC TCAGGCCCTACACTTGGCGG
Downstream 100 bases:
>100_bases GCGCGTTTTCGTGAGCGAGCCGCCGTCCGAGCCGATGTGGTCCGATCTGCAGGTGTCGTATCTGCAGGCGTTGGGGCACA CCGTGTATCTGGATCGCGAT
Product: phosphatidylserine synthase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MDEMRPPPRSRTIYLLPNLFTTAGLFSGFYAIIAAANGQFVQAAMAVFVAAVMDGLDGRVARLTNTSSEFGVQYDSLADL VSFGMAPALVMYHWSLSALKYDSNVMGRVGWSAAFLYAACAALRLARFNTQVGVVDKRWFIGLASPAAAGLMMSFVWAFA DDSLGFDGEQLRYVALAITVVSALLMVSRMRFWSFKGGARGPRADRVPFLALAIATVVIALLVIDLARSFLVIGVLYALS GPLMWLWRRWRRVPELP
Sequences:
>Translated_257_residues MDEMRPPPRSRTIYLLPNLFTTAGLFSGFYAIIAAANGQFVQAAMAVFVAAVMDGLDGRVARLTNTSSEFGVQYDSLADL VSFGMAPALVMYHWSLSALKYDSNVMGRVGWSAAFLYAACAALRLARFNTQVGVVDKRWFIGLASPAAAGLMMSFVWAFA DDSLGFDGEQLRYVALAITVVSALLMVSRMRFWSFKGGARGPRADRVPFLALAIATVVIALLVIDLARSFLVIGVLYALS GPLMWLWRRWRRVPELP >Mature_257_residues MDEMRPPPRSRTIYLLPNLFTTAGLFSGFYAIIAAANGQFVQAAMAVFVAAVMDGLDGRVARLTNTSSEFGVQYDSLADL VSFGMAPALVMYHWSLSALKYDSNVMGRVGWSAAFLYAACAALRLARFNTQVGVVDKRWFIGLASPAAAGLMMSFVWAFA DDSLGFDGEQLRYVALAITVVSALLMVSRMRFWSFKGGARGPRADRVPFLALAIATVVIALLVIDLARSFLVIGVLYALS GPLMWLWRRWRRVPELP
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=153, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 28165; Mature: 28165
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEMRPPPRSRTIYLLPNLFTTAGLFSGFYAIIAAANGQFVQAAMAVFVAAVMDGLDGRV CCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCE ARLTNTSSEFGVQYDSLADLVSFGMAPALVMYHWSLSALKYDSNVMGRVGWSAAFLYAAC EECCCCCHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHH AALRLARFNTQVGVVDKRWFIGLASPAAAGLMMSFVWAFADDSLGFDGEQLRYVALAITV HHHHHHHHCCCCCEEECHHEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH VSALLMVSRMRFWSFKGGARGPRADRVPFLALAIATVVIALLVIDLARSFLVIGVLYALS HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GPLMWLWRRWRRVPELP CHHHHHHHHHHCCCCCC >Mature Secondary Structure MDEMRPPPRSRTIYLLPNLFTTAGLFSGFYAIIAAANGQFVQAAMAVFVAAVMDGLDGRV CCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCE ARLTNTSSEFGVQYDSLADLVSFGMAPALVMYHWSLSALKYDSNVMGRVGWSAAFLYAAC EECCCCCHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHH AALRLARFNTQVGVVDKRWFIGLASPAAAGLMMSFVWAFADDSLGFDGEQLRYVALAITV HHHHHHHHCCCCCEEECHHEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH VSALLMVSRMRFWSFKGGARGPRADRVPFLALAIATVVIALLVIDLARSFLVIGVLYALS HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GPLMWLWRRWRRVPELP CHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]