Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622392
Identifier: 84622392
GI number: 84622392
Start: 792748
End: 794007
Strand: Direct
Name: 84622392
Synonym: XOO_0735
Alternate gene names: NA
Gene position: 792748-794007 (Clockwise)
Preceding gene: 84622387
Following gene: 84622396
Centisome position: 16.05
GC content: 63.97
Gene sequence:
>1260_bases ATGTCCGCTGCCACCGTTGTCCTCCCGTCCGCCAGCGCCACCTACGCCCAGCGCGTCGCCTTCGTGTCCGAAATCGCCTG TCGCCTGCATTCCTATGGCACCACCGCGCAGCGGCTGGAGGCGGCGTTGGTCGGGCTCTCGCAGAAGCTGGGCCTGGACT GCGAGCCGTGGTCCAACCCCACCGGCATCATCCTGAGCTTCAGCGACCCGACCAAGGCGATCGGTTCCAGCGACATCACC CGGGTGATTCGCCTGGCCCCGGGCGAGATCGATCTGTACAAGCTCAGCTTGGCCGACTACGTGGCAGACAGTGTGGCCAA CGGGCGCATGAGCATTGCGCAGGGCCACACCGCATTGCGCCGGCTGGACCGTGAAGTGGGCCGGCGCGGCAAGGCCATGC AGGTGCTGGCCTTCGGGCTGGCCGCAGCGAGCGTGGCCGGGCTGTGGAAGCTGCCATGGCTGGATATCGCCACGGCGGGA GCGATCGGCATGTCGATTGGCCTGCTCACCCAGTACACCGACAAACGTGCTGCCACCAAGGAAGCCGGCGAAGCGCTGGC CGGCCTGCTGGCCGGGGTGGTGGCGTCGCTGGTGGCCTCGTTATTGGGGCCGTTGAATCTCAATACGGTGATCATCGCCT CGCTGGTGGTGCTGCTGCCAGGGATGTCGCTGACCAATGCCTTCAACGAGCTGGCCAGCCAGCACTGGGTTTCCGGCACG GCGCGCCTGGCCGGTGCCGTCACCACGGTGCTTAAGCTGACGGTGGGGGCGGTCATCGCGGTGACGCTGACGCAGTTGGT TGGCCTGAATCCCCAGGTGGCCGCGTTGCGGCCGCAGGCCGGTTGGGTGGAATTGGCGTCGTTAGTGGTGGCCGCTTATG CGTTTGCGGTGCTGTTCAAAGCCAATCGACGCGATTATTTATGGATCATGGCGGCGGCCATGCTCAGCTATGTCATTGCG CGTTGTGCTGGGCATGCCTGGGGCGGCCCTGTCGGGGTATTCGCCTCGGCCATGACATTGACCGCTGCGGGAAATCTTTT CGGGCGCGTGGTCCACAAACCTGGTGCGATGATCCGTTTGCCCGGCATCATCATGCTGGTTCCAGGGGGCGTCAGTTTGC GTGGCTTTTTGACCCTGGTGCAGCAACAGGATGTCAGCGTGGGACAAGCGGCACTATTGGCAGTGACCAATATCGTGATG GCATTGATGGCCGGATTGCTGTTCGGCAATCTGCTGATTCCGGCGCGCAAGAATTTATGA
Upstream 100 bases:
>100_bases TGTGCCTGCGGCCATCTAATAAGCACGCCGGCCACGCGCGCTGCGGCATACACTGTCGGCCTCGCCGACCACGGCGTTTC TCCGATCCGACCCACCACGC
Downstream 100 bases:
>100_bases GCCGGGGGAAAATGCCGCGCAATAAAAACGCCGGCATTGCCGGCGTTTTTATTGGTTTGGGTCAACCAGCCTTGGACTTC CTGGTGGCGCGCTTGGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MSAATVVLPSASATYAQRVAFVSEIACRLHSYGTTAQRLEAALVGLSQKLGLDCEPWSNPTGIILSFSDPTKAIGSSDIT RVIRLAPGEIDLYKLSLADYVADSVANGRMSIAQGHTALRRLDREVGRRGKAMQVLAFGLAAASVAGLWKLPWLDIATAG AIGMSIGLLTQYTDKRAATKEAGEALAGLLAGVVASLVASLLGPLNLNTVIIASLVVLLPGMSLTNAFNELASQHWVSGT ARLAGAVTTVLKLTVGAVIAVTLTQLVGLNPQVAALRPQAGWVELASLVVAAYAFAVLFKANRRDYLWIMAAAMLSYVIA RCAGHAWGGPVGVFASAMTLTAAGNLFGRVVHKPGAMIRLPGIIMLVPGGVSLRGFLTLVQQQDVSVGQAALLAVTNIVM ALMAGLLFGNLLIPARKNL
Sequences:
>Translated_419_residues MSAATVVLPSASATYAQRVAFVSEIACRLHSYGTTAQRLEAALVGLSQKLGLDCEPWSNPTGIILSFSDPTKAIGSSDIT RVIRLAPGEIDLYKLSLADYVADSVANGRMSIAQGHTALRRLDREVGRRGKAMQVLAFGLAAASVAGLWKLPWLDIATAG AIGMSIGLLTQYTDKRAATKEAGEALAGLLAGVVASLVASLLGPLNLNTVIIASLVVLLPGMSLTNAFNELASQHWVSGT ARLAGAVTTVLKLTVGAVIAVTLTQLVGLNPQVAALRPQAGWVELASLVVAAYAFAVLFKANRRDYLWIMAAAMLSYVIA RCAGHAWGGPVGVFASAMTLTAAGNLFGRVVHKPGAMIRLPGIIMLVPGGVSLRGFLTLVQQQDVSVGQAALLAVTNIVM ALMAGLLFGNLLIPARKNL >Mature_418_residues SAATVVLPSASATYAQRVAFVSEIACRLHSYGTTAQRLEAALVGLSQKLGLDCEPWSNPTGIILSFSDPTKAIGSSDITR VIRLAPGEIDLYKLSLADYVADSVANGRMSIAQGHTALRRLDREVGRRGKAMQVLAFGLAAASVAGLWKLPWLDIATAGA IGMSIGLLTQYTDKRAATKEAGEALAGLLAGVVASLVASLLGPLNLNTVIIASLVVLLPGMSLTNAFNELASQHWVSGTA RLAGAVTTVLKLTVGAVIAVTLTQLVGLNPQVAALRPQAGWVELASLVVAAYAFAVLFKANRRDYLWIMAAAMLSYVIAR CAGHAWGGPVGVFASAMTLTAAGNLFGRVVHKPGAMIRLPGIIMLVPGGVSLRGFLTLVQQQDVSVGQAALLAVTNIVMA LMAGLLFGNLLIPARKNL
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43586; Mature: 43455
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAATVVLPSASATYAQRVAFVSEIACRLHSYGTTAQRLEAALVGLSQKLGLDCEPWSNP CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC TGIILSFSDPTKAIGSSDITRVIRLAPGEIDLYKLSLADYVADSVANGRMSIAQGHTALR CEEEEECCCCHHHCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHH RLDREVGRRGKAMQVLAFGLAAASVAGLWKLPWLDIATAGAIGMSIGLLTQYTDKRAATK HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EAGEALAGLLAGVVASLVASLLGPLNLNTVIIASLVVLLPGMSLTNAFNELASQHWVSGT HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHH ARLAGAVTTVLKLTVGAVIAVTLTQLVGLNPQVAALRPQAGWVELASLVVAAYAFAVLFK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH ANRRDYLWIMAAAMLSYVIARCAGHAWGGPVGVFASAMTLTAAGNLFGRVVHKPGAMIRL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE PGIIMLVPGGVSLRGFLTLVQQQDVSVGQAALLAVTNIVMALMAGLLFGNLLIPARKNL CCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SAATVVLPSASATYAQRVAFVSEIACRLHSYGTTAQRLEAALVGLSQKLGLDCEPWSNP CCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC TGIILSFSDPTKAIGSSDITRVIRLAPGEIDLYKLSLADYVADSVANGRMSIAQGHTALR CEEEEECCCCHHHCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHH RLDREVGRRGKAMQVLAFGLAAASVAGLWKLPWLDIATAGAIGMSIGLLTQYTDKRAATK HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EAGEALAGLLAGVVASLVASLLGPLNLNTVIIASLVVLLPGMSLTNAFNELASQHWVSGT HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHH ARLAGAVTTVLKLTVGAVIAVTLTQLVGLNPQVAALRPQAGWVELASLVVAAYAFAVLFK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH ANRRDYLWIMAAAMLSYVIARCAGHAWGGPVGVFASAMTLTAAGNLFGRVVHKPGAMIRL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE PGIIMLVPGGVSLRGFLTLVQQQDVSVGQAALLAVTNIVMALMAGLLFGNLLIPARKNL CCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA