Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84622347
Identifier: 84622347
GI number: 84622347
Start: 743969
End: 744538
Strand: Direct
Name: 84622347
Synonym: XOO_0690
Alternate gene names: NA
Gene position: 743969-744538 (Clockwise)
Preceding gene: 84622346
Following gene: 84622350
Centisome position: 15.06
GC content: 72.28
Gene sequence:
>570_bases GTGCTGGACGCGGCGGCGTCGGGGCTGTCGATGGCTGCCTCGCGGCTGTCTGCCGCGCCGCGGACAGCCGGACTCACCGG GACTGTCAGCGGTGCGCTGTGGGCAGGCGGCGCGGCGATCAACCAACTTGGCAACGTGCCTGCCAATGCCCTGGTATCCG GGGCTAACGCAGTAGGTGCTGCTGCAGGTGTTCTGAGCGCGGTGGCACCGTCGCTGACCGGCAGCGACAACACCAGTGTG GCCTACGCGTCGGCGGCGGCCTGGGCGGTGAACGGCGGCGCCAACCTGCTGCGCGCCGCCAACGATGCCGGACGCGCGTT GCCCAGCCGGGTGCTGCAGGGCGTCAGTGGTGCGGCGAATATGGCCGCTGCCGGGCTGGCGGCCGCCGCAACCGCGGCAT CGCAGCAGAATGCGCCGCTCAAGGCGGTCAACCTGGGTACCGCATCGTCGGTGGCCTGGGGCATTGGTGCTTTCGCCGCG CTCGGCTCGGCGTGGACGGCGGCCCCACGCGACGACGCCTCTGTGGAGGCCGCGCCAGCCCAGCTCCAGCGGTCCGACGC TGCGGTTTGA
Upstream 100 bases:
>100_bases ACCTGCACCAAGGCCACCTGCGGACGTTAACGCGCCAGCGCAGACCGCGCATGCAGCAGCGCCGGGAAGGCTGCAGCAGC TGGGTGCCTACGGTGGCCCG
Downstream 100 bases:
>100_bases GTCAGTGGTCTGACGTAGCGGTTTCAGCGGATGTACAGAAGCGACGCGGAGCATTGCCAGCGTCGTCGCGACGGCCTGCC TCGGTCCGATGGCCCTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MLDAAASGLSMAASRLSAAPRTAGLTGTVSGALWAGGAAINQLGNVPANALVSGANAVGAAAGVLSAVAPSLTGSDNTSV AYASAAAWAVNGGANLLRAANDAGRALPSRVLQGVSGAANMAAAGLAAAATAASQQNAPLKAVNLGTASSVAWGIGAFAA LGSAWTAAPRDDASVEAAPAQLQRSDAAV
Sequences:
>Translated_189_residues MLDAAASGLSMAASRLSAAPRTAGLTGTVSGALWAGGAAINQLGNVPANALVSGANAVGAAAGVLSAVAPSLTGSDNTSV AYASAAAWAVNGGANLLRAANDAGRALPSRVLQGVSGAANMAAAGLAAAATAASQQNAPLKAVNLGTASSVAWGIGAFAA LGSAWTAAPRDDASVEAAPAQLQRSDAAV >Mature_189_residues MLDAAASGLSMAASRLSAAPRTAGLTGTVSGALWAGGAAINQLGNVPANALVSGANAVGAAAGVLSAVAPSLTGSDNTSV AYASAAAWAVNGGANLLRAANDAGRALPSRVLQGVSGAANMAAAGLAAAATAASQQNAPLKAVNLGTASSVAWGIGAFAA LGSAWTAAPRDDASVEAAPAQLQRSDAAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17718; Mature: 17718
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDAAASGLSMAASRLSAAPRTAGLTGTVSGALWAGGAAINQLGNVPANALVSGANAVGA CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCHHHHHHHCCCCHHHHHCCCHHHHH AAGVLSAVAPSLTGSDNTSVAYASAAAWAVNGGANLLRAANDAGRALPSRVLQGVSGAAN HHHHHHHHCCCCCCCCCCCEEEEHHHHEEECCCHHHHHHCCHHHHHHHHHHHHHCCCHHH MAAAGLAAAATAASQQNAPLKAVNLGTASSVAWGIGAFAALGSAWTAAPRDDASVEAAPA HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH QLQRSDAAV HHHHCCCCC >Mature Secondary Structure MLDAAASGLSMAASRLSAAPRTAGLTGTVSGALWAGGAAINQLGNVPANALVSGANAVGA CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCHHHHHHHCCCCHHHHHCCCHHHHH AAGVLSAVAPSLTGSDNTSVAYASAAAWAVNGGANLLRAANDAGRALPSRVLQGVSGAAN HHHHHHHHCCCCCCCCCCCEEEEHHHHEEECCCHHHHHHCCHHHHHHHHHHHHHCCCHHH MAAAGLAAAATAASQQNAPLKAVNLGTASSVAWGIGAFAALGSAWTAAPRDDASVEAAPA HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH QLQRSDAAV HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA