Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is zraS [C]
Identifier: 84622277
GI number: 84622277
Start: 674808
End: 676505
Strand: Direct
Name: zraS [C]
Synonym: XOO_0619
Alternate gene names: 84622277
Gene position: 674808-676505 (Clockwise)
Preceding gene: 84622274
Following gene: 84622285
Centisome position: 13.66
GC content: 65.67
Gene sequence:
>1698_bases ATGGCGCGTGTCAGCGGCCGCCGCGGTGGTGGTGCGATGCAGGCGGTGCTACCGGCGGGGCGGGCAGCGGCGAGGCGGGC GCGGTGCTGGCCCGTTACATGGTCAGGCAGAAGGCTCATCGGTGTCCCCAGAACGTGGTGGGCGGAGCGACTGGCGCCGA CCGAACTCCAAGGCATCCCCCTGTCGATGCGGAGTTGTGTCGGCGAACACGAAGTGCGCCAAAAACTTGTCACGCAGATC CCGGGCTGTCACCAAACGACGATTGCATCCACTCACCACCGATGTGAGCATCCAGCGTTGTCTAGGTCGCCTGCTGCCAG TTCTGTGAAATTCATCTCAGTTTTGCCCTGGTTGCAGCCACCGACGTCCGCCAGTGCCAGCGACCATCGGCATGCGGCGT TCCTGCAAGTGTTGCTGGCGGCGATCGTGCTCTATACCGCCGGCGACATCGGCCTGTTTCTCTACGTGGCTGGCGCTGCG CGCTTGCTGAGTCACACGGACCTGTTGTTTGCCCTGGTGGGTAGCGTGCTCACTGCGGTAGGTGCGGCGCTGGGCGTGTG GCGCGTGCGGCGCGGCGACAATGCGGGGGCGGTGCGGACTTACGTGGCCGCGACGTTGATCGGCGTGGTGGTTACCTATG TGCGGGTGGACATTTACGACCTGCTGACCAACCCCATGCCCTTGCTGGCGCTGGTACTCGCCGGCATGGTGCTGGGGAGT CGCGCGCTCTGGCGCGTGTTCCTGTTGCTGGCGGCTGCTGCGTTGCTGGGCGTGCTCGCACAGGTGATCTGGCCGGTGCC CTGGCGCTCGGTGCGCGGCAACATCGGCTTGGGCCTGGTGACCGTCGGTGCCTATCTGCTGATCACTCTCAGCCTGGATC GCACCATCGCCGCATTGCGTGACAGCCTGCTCGAATCAGAACACCGCCGGCGCGAACTGGAACAGCTCAATCGCCGTCTG CTGCAGGAAATGGCCGAGCGCGAACGCGTGCAGGAGCAACTGATCCACATCCAGAAAATGGAAGCGCTCGGGCGTCTGGC AGCTGGCGTCGCGCACGATTTCGATAATCTGATCAACGTGATCATCGGCTACGCGCAACGGCGCGATGCGCTGGAGGGCT ACGGCGAAGCGCCGCTGCTCAAAACGCTGGAAAACATCGAGACCGCCTCGCGGCGCGCGTTGACAGTCAGCCGGCGCATC CTCAACTTCGGCCGCGCCGAGCCCGACCTGCCGACCCTGTTCGATGCCCGCGCAGCACTGCGCGATGCCGAACCCACCTT GCGTCAGCTATTCGGGCACGACATCCGGCTGGAGTGCATCGCCGCCGGGCCGCCGCTGTGGGTCCTGATGGATCGCGATG ATCTCGAACTGGTGCTGCTCAACATCGCCGCCAACGCGCGCGACGCGATGGAGGAGCAGGGCGTGTTCCGTATCGAAGGC GAGTTGCGCGAGGCCACGGTGTGCTTGCGTTTCTGCGATACCGGTCCGGGCATTGCACCGCATCTGCTGGCGCGAATTCT CGAGCCGTTCTACACCACCAAGCCGGTCGGCAAGGGCACCGGGCTGGGCTTGTCGGTGGTGCAAAGCATCATCGCCGCGG CCGGTGGCCAGGTGGCGGCGTGCAATGGTCCGCAAGGCGGGGCCTGTCTGTGCCTGCAATTGCCGCTGGCGGCGGCGCCT CAGTCGGCCAGCAGGTAG
Upstream 100 bases:
>100_bases GTCGGCGGTGCTGGCTTGGCTGGTCGGGCTTGTCGCTTCTGGCGCAGGTGTGGCGGTGTGTGCAGTTGCCAGACGACTGG CCAGAAACAGGAGGGTGAGC
Downstream 100 bases:
>100_bases CCCATGCCACGGGAGGACAACAGCGGCAGCGCCGGTGTCCGATCGCTGGAGATGCGTGCGGCCTTGCGCCGCAGACGATG GATCAGCATTTCCAGCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MARVSGRRGGGAMQAVLPAGRAAARRARCWPVTWSGRRLIGVPRTWWAERLAPTELQGIPLSMRSCVGEHEVRQKLVTQI PGCHQTTIASTHHRCEHPALSRSPAASSVKFISVLPWLQPPTSASASDHRHAAFLQVLLAAIVLYTAGDIGLFLYVAGAA RLLSHTDLLFALVGSVLTAVGAALGVWRVRRGDNAGAVRTYVAATLIGVVVTYVRVDIYDLLTNPMPLLALVLAGMVLGS RALWRVFLLLAAAALLGVLAQVIWPVPWRSVRGNIGLGLVTVGAYLLITLSLDRTIAALRDSLLESEHRRRELEQLNRRL LQEMAERERVQEQLIHIQKMEALGRLAAGVAHDFDNLINVIIGYAQRRDALEGYGEAPLLKTLENIETASRRALTVSRRI LNFGRAEPDLPTLFDARAALRDAEPTLRQLFGHDIRLECIAAGPPLWVLMDRDDLELVLLNIAANARDAMEEQGVFRIEG ELREATVCLRFCDTGPGIAPHLLARILEPFYTTKPVGKGTGLGLSVVQSIIAAAGGQVAACNGPQGGACLCLQLPLAAAP QSASR
Sequences:
>Translated_565_residues MARVSGRRGGGAMQAVLPAGRAAARRARCWPVTWSGRRLIGVPRTWWAERLAPTELQGIPLSMRSCVGEHEVRQKLVTQI PGCHQTTIASTHHRCEHPALSRSPAASSVKFISVLPWLQPPTSASASDHRHAAFLQVLLAAIVLYTAGDIGLFLYVAGAA RLLSHTDLLFALVGSVLTAVGAALGVWRVRRGDNAGAVRTYVAATLIGVVVTYVRVDIYDLLTNPMPLLALVLAGMVLGS RALWRVFLLLAAAALLGVLAQVIWPVPWRSVRGNIGLGLVTVGAYLLITLSLDRTIAALRDSLLESEHRRRELEQLNRRL LQEMAERERVQEQLIHIQKMEALGRLAAGVAHDFDNLINVIIGYAQRRDALEGYGEAPLLKTLENIETASRRALTVSRRI LNFGRAEPDLPTLFDARAALRDAEPTLRQLFGHDIRLECIAAGPPLWVLMDRDDLELVLLNIAANARDAMEEQGVFRIEG ELREATVCLRFCDTGPGIAPHLLARILEPFYTTKPVGKGTGLGLSVVQSIIAAAGGQVAACNGPQGGACLCLQLPLAAAP QSASR >Mature_564_residues ARVSGRRGGGAMQAVLPAGRAAARRARCWPVTWSGRRLIGVPRTWWAERLAPTELQGIPLSMRSCVGEHEVRQKLVTQIP GCHQTTIASTHHRCEHPALSRSPAASSVKFISVLPWLQPPTSASASDHRHAAFLQVLLAAIVLYTAGDIGLFLYVAGAAR LLSHTDLLFALVGSVLTAVGAALGVWRVRRGDNAGAVRTYVAATLIGVVVTYVRVDIYDLLTNPMPLLALVLAGMVLGSR ALWRVFLLLAAAALLGVLAQVIWPVPWRSVRGNIGLGLVTVGAYLLITLSLDRTIAALRDSLLESEHRRRELEQLNRRLL QEMAERERVQEQLIHIQKMEALGRLAAGVAHDFDNLINVIIGYAQRRDALEGYGEAPLLKTLENIETASRRALTVSRRIL NFGRAEPDLPTLFDARAALRDAEPTLRQLFGHDIRLECIAAGPPLWVLMDRDDLELVLLNIAANARDAMEEQGVFRIEGE LREATVCLRFCDTGPGIAPHLLARILEPFYTTKPVGKGTGLGLSVVQSIIAAAGGQVAACNGPQGGACLCLQLPLAAAPQ SASR
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=239, Percent_Identity=32.2175732217573, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1788549, Length=245, Percent_Identity=29.7959183673469, Blast_Score=86, Evalue=9e-18, Organism=Escherichia coli, GI1788393, Length=113, Percent_Identity=32.7433628318584, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI87081816, Length=135, Percent_Identity=34.8148148148148, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 61167; Mature: 61036
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVSGRRGGGAMQAVLPAGRAAARRARCWPVTWSGRRLIGVPRTWWAERLAPTELQGIP CCCCCCCCCCCHHHHHHCCCHHHHHCCCCCCEECCCCEEECCCCHHHHHHCCCCCCCCCC LSMRSCVGEHEVRQKLVTQIPGCHQTTIASTHHRCEHPALSRSPAASSVKFISVLPWLQP HHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCC PTSASASDHRHAAFLQVLLAAIVLYTAGDIGLFLYVAGAARLLSHTDLLFALVGSVLTAV CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAALGVWRVRRGDNAGAVRTYVAATLIGVVVTYVRVDIYDLLTNPMPLLALVLAGMVLGS HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RALWRVFLLLAAAALLGVLAQVIWPVPWRSVRGNIGLGLVTVGAYLLITLSLDRTIAALR HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DSLLESEHRRRELEQLNRRLLQEMAERERVQEQLIHIQKMEALGRLAAGVAHDFDNLINV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIGYAQRRDALEGYGEAPLLKTLENIETASRRALTVSRRILNFGRAEPDLPTLFDARAAL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH RDAEPTLRQLFGHDIRLECIAAGPPLWVLMDRDDLELVLLNIAANARDAMEEQGVFRIEG HCCCHHHHHHCCCCCEEEEEECCCCEEEEECCCCCEEEEEEHHCCHHHHHHHCCCEEEEC ELREATVCLRFCDTGPGIAPHLLARILEPFYTTKPVGKGTGLGLSVVQSIIAAAGGQVAA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEE CNGPQGGACLCLQLPLAAAPQSASR CCCCCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure ARVSGRRGGGAMQAVLPAGRAAARRARCWPVTWSGRRLIGVPRTWWAERLAPTELQGIP CCCCCCCCCCHHHHHHCCCHHHHHCCCCCCEECCCCEEECCCCHHHHHHCCCCCCCCCC LSMRSCVGEHEVRQKLVTQIPGCHQTTIASTHHRCEHPALSRSPAASSVKFISVLPWLQP HHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCC PTSASASDHRHAAFLQVLLAAIVLYTAGDIGLFLYVAGAARLLSHTDLLFALVGSVLTAV CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAALGVWRVRRGDNAGAVRTYVAATLIGVVVTYVRVDIYDLLTNPMPLLALVLAGMVLGS HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RALWRVFLLLAAAALLGVLAQVIWPVPWRSVRGNIGLGLVTVGAYLLITLSLDRTIAALR HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DSLLESEHRRRELEQLNRRLLQEMAERERVQEQLIHIQKMEALGRLAAGVAHDFDNLINV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIGYAQRRDALEGYGEAPLLKTLENIETASRRALTVSRRILNFGRAEPDLPTLFDARAAL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH RDAEPTLRQLFGHDIRLECIAAGPPLWVLMDRDDLELVLLNIAANARDAMEEQGVFRIEG HCCCHHHHHHCCCCCEEEEEECCCCEEEEECCCCCEEEEEEHHCCHHHHHHHCCCEEEEC ELREATVCLRFCDTGPGIAPHLLARILEPFYTTKPVGKGTGLGLSVVQSIIAAAGGQVAA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEE CNGPQGGACLCLQLPLAAAPQSASR CCCCCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA