Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84622274

Identifier: 84622274

GI number: 84622274

Start: 669338

End: 669874

Strand: Direct

Name: 84622274

Synonym: XOO_0617

Alternate gene names: NA

Gene position: 669338-669874 (Clockwise)

Preceding gene: 84622272

Following gene: 84622277

Centisome position: 13.55

GC content: 63.87

Gene sequence:

>537_bases
ATGCCCGACAACAGCGCCGACTACGATGAACCGGATGACCTCAGCGCCGACAACGACGACGATCCGGACACCCATCAGGG
GCTGGTCTGGAACCTGTTGCTGCTGATCAATCCGGGCGACGAAGAAACCGCGCTGCGCCAGTTCGATGCCTATCGCGAGA
GCGCCGGCGAGACCGATGGCGATGCGTGGTTATGGGCGCTGAAGGATGCGATCGACTGGAGCTCAGGGTTCTACGTGGAT
GGCAGCGACAGCGAAACGCTGATCAGTGCGATCGACGAACTGGCCGCACGCTGGAACTTGCGCATCGACTGGGGCGGCGA
CATGGACGATGACGACTTCCTGGTCGCCAACGACACCGCCGCGCTGCTGACGGTGGCGTACGATCGCCTGCGCGAATACG
GCTACACCCTGTGGTGTTGGGACACCGGCAGCGACGACCGTGCCGGCTGGATGGCACTGAGCCGCAACGATGAGGACATG
CAGCGGCTGGCAGCGATCCTGGGTGCGGATCTGCGCCCGGGCAGCGATCCGTTCTAA

Upstream 100 bases:

>100_bases
AAGACCAGCCCCGGCGACGCAGTTGCGTGCGGCAATCTGTTTGCTTGCGCGCCATCAGGCCTCACACTTCCGCCCTGCAA
TCTGTGGAAGTGAGACCGTG

Downstream 100 bases:

>100_bases
CCCGCTTGCCGACGACTGCCGCCCGGGCCACGGCCAGTGGGGATGAGAACAACGTTGCCGAACCGCAGGCATGGCATGGC
ATGGCGTGCCCTGCGCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MPDNSADYDEPDDLSADNDDDPDTHQGLVWNLLLLINPGDEETALRQFDAYRESAGETDGDAWLWALKDAIDWSSGFYVD
GSDSETLISAIDELAARWNLRIDWGGDMDDDDFLVANDTAALLTVAYDRLREYGYTLWCWDTGSDDRAGWMALSRNDEDM
QRLAAILGADLRPGSDPF

Sequences:

>Translated_178_residues
MPDNSADYDEPDDLSADNDDDPDTHQGLVWNLLLLINPGDEETALRQFDAYRESAGETDGDAWLWALKDAIDWSSGFYVD
GSDSETLISAIDELAARWNLRIDWGGDMDDDDFLVANDTAALLTVAYDRLREYGYTLWCWDTGSDDRAGWMALSRNDEDM
QRLAAILGADLRPGSDPF
>Mature_177_residues
PDNSADYDEPDDLSADNDDDPDTHQGLVWNLLLLINPGDEETALRQFDAYRESAGETDGDAWLWALKDAIDWSSGFYVDG
SDSETLISAIDELAARWNLRIDWGGDMDDDDFLVANDTAALLTVAYDRLREYGYTLWCWDTGSDDRAGWMALSRNDEDMQ
RLAAILGADLRPGSDPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19939; Mature: 19808

Theoretical pI: Translated: 3.55; Mature: 3.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDNSADYDEPDDLSADNDDDPDTHQGLVWNLLLLINPGDEETALRQFDAYRESAGETDG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCC
DAWLWALKDAIDWSSGFYVDGSDSETLISAIDELAARWNLRIDWGGDMDDDDFLVANDTA
CHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEECCHH
ALLTVAYDRLREYGYTLWCWDTGSDDRAGWMALSRNDEDMQRLAAILGADLRPGSDPF
HHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PDNSADYDEPDDLSADNDDDPDTHQGLVWNLLLLINPGDEETALRQFDAYRESAGETDG
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCC
DAWLWALKDAIDWSSGFYVDGSDSETLISAIDELAARWNLRIDWGGDMDDDDFLVANDTA
CHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEECCHH
ALLTVAYDRLREYGYTLWCWDTGSDDRAGWMALSRNDEDMQRLAAILGADLRPGSDPF
HHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA