Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622274
Identifier: 84622274
GI number: 84622274
Start: 669338
End: 669874
Strand: Direct
Name: 84622274
Synonym: XOO_0617
Alternate gene names: NA
Gene position: 669338-669874 (Clockwise)
Preceding gene: 84622272
Following gene: 84622277
Centisome position: 13.55
GC content: 63.87
Gene sequence:
>537_bases ATGCCCGACAACAGCGCCGACTACGATGAACCGGATGACCTCAGCGCCGACAACGACGACGATCCGGACACCCATCAGGG GCTGGTCTGGAACCTGTTGCTGCTGATCAATCCGGGCGACGAAGAAACCGCGCTGCGCCAGTTCGATGCCTATCGCGAGA GCGCCGGCGAGACCGATGGCGATGCGTGGTTATGGGCGCTGAAGGATGCGATCGACTGGAGCTCAGGGTTCTACGTGGAT GGCAGCGACAGCGAAACGCTGATCAGTGCGATCGACGAACTGGCCGCACGCTGGAACTTGCGCATCGACTGGGGCGGCGA CATGGACGATGACGACTTCCTGGTCGCCAACGACACCGCCGCGCTGCTGACGGTGGCGTACGATCGCCTGCGCGAATACG GCTACACCCTGTGGTGTTGGGACACCGGCAGCGACGACCGTGCCGGCTGGATGGCACTGAGCCGCAACGATGAGGACATG CAGCGGCTGGCAGCGATCCTGGGTGCGGATCTGCGCCCGGGCAGCGATCCGTTCTAA
Upstream 100 bases:
>100_bases AAGACCAGCCCCGGCGACGCAGTTGCGTGCGGCAATCTGTTTGCTTGCGCGCCATCAGGCCTCACACTTCCGCCCTGCAA TCTGTGGAAGTGAGACCGTG
Downstream 100 bases:
>100_bases CCCGCTTGCCGACGACTGCCGCCCGGGCCACGGCCAGTGGGGATGAGAACAACGTTGCCGAACCGCAGGCATGGCATGGC ATGGCGTGCCCTGCGCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MPDNSADYDEPDDLSADNDDDPDTHQGLVWNLLLLINPGDEETALRQFDAYRESAGETDGDAWLWALKDAIDWSSGFYVD GSDSETLISAIDELAARWNLRIDWGGDMDDDDFLVANDTAALLTVAYDRLREYGYTLWCWDTGSDDRAGWMALSRNDEDM QRLAAILGADLRPGSDPF
Sequences:
>Translated_178_residues MPDNSADYDEPDDLSADNDDDPDTHQGLVWNLLLLINPGDEETALRQFDAYRESAGETDGDAWLWALKDAIDWSSGFYVD GSDSETLISAIDELAARWNLRIDWGGDMDDDDFLVANDTAALLTVAYDRLREYGYTLWCWDTGSDDRAGWMALSRNDEDM QRLAAILGADLRPGSDPF >Mature_177_residues PDNSADYDEPDDLSADNDDDPDTHQGLVWNLLLLINPGDEETALRQFDAYRESAGETDGDAWLWALKDAIDWSSGFYVDG SDSETLISAIDELAARWNLRIDWGGDMDDDDFLVANDTAALLTVAYDRLREYGYTLWCWDTGSDDRAGWMALSRNDEDMQ RLAAILGADLRPGSDPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19939; Mature: 19808
Theoretical pI: Translated: 3.55; Mature: 3.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDNSADYDEPDDLSADNDDDPDTHQGLVWNLLLLINPGDEETALRQFDAYRESAGETDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCC DAWLWALKDAIDWSSGFYVDGSDSETLISAIDELAARWNLRIDWGGDMDDDDFLVANDTA CHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEECCHH ALLTVAYDRLREYGYTLWCWDTGSDDRAGWMALSRNDEDMQRLAAILGADLRPGSDPF HHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PDNSADYDEPDDLSADNDDDPDTHQGLVWNLLLLINPGDEETALRQFDAYRESAGETDG CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCC DAWLWALKDAIDWSSGFYVDGSDSETLISAIDELAARWNLRIDWGGDMDDDDFLVANDTA CHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEECCHH ALLTVAYDRLREYGYTLWCWDTGSDDRAGWMALSRNDEDMQRLAAILGADLRPGSDPF HHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA