Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is ynbA [C]
Identifier: 84622164
GI number: 84622164
Start: 554311
End: 554637
Strand: Direct
Name: ynbA [C]
Synonym: XOO_0507
Alternate gene names: 84622164
Gene position: 554311-554637 (Clockwise)
Preceding gene: 84622156
Following gene: 84622165
Centisome position: 11.22
GC content: 73.7
Gene sequence:
>327_bases GTGGTGGCCGATGCGGCGCTGTACTTGAGCCTGCTGGGCGTGCCCGGTGTGAGCGCGCACTGGCTGTGGGTCTTCGCGCT GCTGGCCGCGCTCACCGAATACGCCGGCGTGCTCGGCCTGATGGTTGGCGCCAGCCGCCGTTACGACGGGCCGATGGGCA AGCGCGACCGCGCCTTCGTCATCGGCGTGCTGGGCGTAGGCCTGGCCAGCGGACTGCTGGGCGCTCGCGGGGTCACCTGG GTGGCCATCGTGCTGAGTCTGGCCTGCATGGCCACGGTGGGGCGGCGCGTGCGGGCCGACCTGGCCGAGGCGCCCGCAGG CGCCTAG
Upstream 100 bases:
>100_bases ATGCTGGTGCGTATGGCGCTCAATGCGGTAGACGGCATGTTGGCGCGCGAGTTCGGTCAGCAATCGCGGCTGGGCGCCTA CCTCAACGAAACTTTGCGAT
Downstream 100 bases:
>100_bases CGGTACATCCCGCAGCGCCGCCGCTGGGCGCGCCGCTCTCGGGTGACCTTTGCGATTCAACCTCTTTCGACGTTTTCAGG ATGCTTCAATGCGCACAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: CDP-Alcohol Phosphatidyltransferase Family Protein; Phosphomethylpyrimidine Kinase; CDP-Diacylglycerol-Inositol 3-Phosphatidyltransferase
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MVADAALYLSLLGVPGVSAHWLWVFALLAALTEYAGVLGLMVGASRRYDGPMGKRDRAFVIGVLGVGLASGLLGARGVTW VAIVLSLACMATVGRRVRADLAEAPAGA
Sequences:
>Translated_108_residues MVADAALYLSLLGVPGVSAHWLWVFALLAALTEYAGVLGLMVGASRRYDGPMGKRDRAFVIGVLGVGLASGLLGARGVTW VAIVLSLACMATVGRRVRADLAEAPAGA >Mature_108_residues MVADAALYLSLLGVPGVSAHWLWVFALLAALTEYAGVLGLMVGASRRYDGPMGKRDRAFVIGVLGVGLASGLLGARGVTW VAIVLSLACMATVGRRVRADLAEAPAGA
Specific function: Unknown
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Integral membrane protein (Potential) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11067; Mature: 11067
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVADAALYLSLLGVPGVSAHWLWVFALLAALTEYAGVLGLMVGASRRYDGPMGKRDRAFV CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH IGVLGVGLASGLLGARGVTWVAIVLSLACMATVGRRVRADLAEAPAGA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVADAALYLSLLGVPGVSAHWLWVFALLAALTEYAGVLGLMVGASRRYDGPMGKRDRAFV CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH IGVLGVGLASGLLGARGVTWVAIVLSLACMATVGRRVRADLAEAPAGA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA