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The map label for this gene is ynbC [H]

Identifier: 84622165

GI number: 84622165

Start: 554763

End: 555164

Strand: Direct

Name: ynbC [H]

Synonym: XOO_0508

Alternate gene names: 84622165

Gene position: 554763-555164 (Clockwise)

Preceding gene: 84622164

Following gene: 84622166

Centisome position: 11.23

GC content: 67.91

Gene sequence:

>402_bases
ATGGTGCGCCGCTGTTTTAACGGCATTGGCCGCTGCACGATGCCGCGACTACCGGCACGCCCAAGGCGGTGGTGCTGCTG
CATCGCGGCCATGAGCACTTCGGCCGGGGATGCATCGGCCGAAGAACTCGACATGCCCGACGCGCAGTTCTTCGCCTGGG
ACGCACGCGGCAACGGCCGCTCGCCCGGCGTGCGCGGCGATGCGCCGGGCTTCGAAGCACTGGTGCGCGATCTGGACGGC
TTTATCGCACACCTCGGCGCCACCCACGGCATTGCGGTGCAGGACATGGTGGTCATTGCGCAGAGTGTGGGCGCGGTGGT
GGCCGCCACCTGGGTGCACGATTACGCCCCACCGCTGCGCGCCTTGGTGCTGGCATCGCCCGCGTTCAAGGTGACATTGT
AG

Upstream 100 bases:

>100_bases
GGGCGCGCCGCTCTCGGGTGACCTTTGCGATTCAACCTCTTTCGACGTTTTCAGGATGCTTCAATGCGCACAGTACTAGA
GCGCGAGTTCGTCAGTTTCG

Downstream 100 bases:

>100_bases
GTGCCGTTCGCACGCGCCGGGCTGGCGCTACTGCATGCGCTGCGCGGCAACTTTTTCGTCAATAGTTACGTCAAGCCGCA
GTGGTTGACGCACGATCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MVRRCFNGIGRCTMPRLPARPRRWCCCIAAMSTSAGDASAEELDMPDAQFFAWDARGNGRSPGVRGDAPGFEALVRDLDG
FIAHLGATHGIAVQDMVVIAQSVGAVVAATWVHDYAPPLRALVLASPAFKVTL

Sequences:

>Translated_133_residues
MVRRCFNGIGRCTMPRLPARPRRWCCCIAAMSTSAGDASAEELDMPDAQFFAWDARGNGRSPGVRGDAPGFEALVRDLDG
FIAHLGATHGIAVQDMVVIAQSVGAVVAATWVHDYAPPLRALVLASPAFKVTL
>Mature_133_residues
MVRRCFNGIGRCTMPRLPARPRRWCCCIAAMSTSAGDASAEELDMPDAQFFAWDARGNGRSPGVRGDAPGFEALVRDLDG
FIAHLGATHGIAVQDMVVIAQSVGAVVAATWVHDYAPPLRALVLASPAFKVTL

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787678, Length=93, Percent_Identity=56.989247311828, Blast_Score=112, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022742
- InterPro:   IPR022744 [H]

Pfam domain/function: PF12146 Hydrolase_4; PF12147 Hydrolase_5 [H]

EC number: NA

Molecular weight: Translated: 14168; Mature: 14168

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRCFNGIGRCTMPRLPARPRRWCCCIAAMSTSAGDASAEELDMPDAQFFAWDARGNGR
CCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEEECCCCCC
SPGVRGDAPGFEALVRDLDGFIAHLGATHGIAVQDMVVIAQSVGAVVAATWVHDYAPPLR
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ALVLASPAFKVTL
HHHHCCCCEEEEC
>Mature Secondary Structure
MVRRCFNGIGRCTMPRLPARPRRWCCCIAAMSTSAGDASAEELDMPDAQFFAWDARGNGR
CCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEEECCCCCC
SPGVRGDAPGFEALVRDLDGFIAHLGATHGIAVQDMVVIAQSVGAVVAATWVHDYAPPLR
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ALVLASPAFKVTL
HHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]