Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is dut [H]
Identifier: 84622121
GI number: 84622121
Start: 502937
End: 503404
Strand: Direct
Name: dut [H]
Synonym: XOO_0464
Alternate gene names: 84622121
Gene position: 502937-503404 (Clockwise)
Preceding gene: 84622120
Following gene: 84622122
Centisome position: 10.18
GC content: 68.38
Gene sequence:
>468_bases ATGAGCACCCCGACCCAGTCCTTGCAGGTGAAGTTGCTCGACCCGCGCTTCGGCGATCTGTGGCCGTTGCCGGCCTATGC CACCGAATCCAGTGCAGGCATGGACCTGCGCGCCGCGCTGGAGGCGCCGATGACGCTGCAGCCGGGCGATGCGGCGCTGA TCCCCAGCGGCATCGCGATCCATCTGGCCGACCCGCAGCTGTGCGCGGTGATCCTGCCGCGCTCGGGGTTGGGCCATCGC CACGGCATCGTGCTCGGCAACGGTACCGGCCTCATCGATGCGGATTACCAGGGGCCGTTGCTGATCAGCACCTGGAATCG CGGCCGCGAGGCCTTCACCATCGAGCCGGGCGACCGCATTGCGCAGCTGGTGATCCTGCCGATCGTGCGCGCGGGCTTGC AAGTGGTGGATACTTTCGTTGACAGCGCGCGGGGAGCGGGTGGATTCGGCCACACCGGCGTGCGCTGA
Upstream 100 bases:
>100_bases CCACTGCCTATTGGCCGGGCGGCGAGCGCGCGTTTCCCAGTAGCAGCAAGACTGAATTGGCCGACCAACTACTGGCCTTG ATTGCGGAGAGATTGCAGGC
Downstream 100 bases:
>100_bases CTGGGGAAATCACATGAGCAACGCGAACGAGCGCAGGCAGTCGATGTCCAGCGTGCGTATGAGTGGTCTGGTGTTGGCGG GCATATTGCTGTTGCTGGCC
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSTPTQSLQVKLLDPRFGDLWPLPAYATESSAGMDLRAALEAPMTLQPGDAALIPSGIAIHLADPQLCAVILPRSGLGHR HGIVLGNGTGLIDADYQGPLLISTWNRGREAFTIEPGDRIAQLVILPIVRAGLQVVDTFVDSARGAGGFGHTGVR
Sequences:
>Translated_155_residues MSTPTQSLQVKLLDPRFGDLWPLPAYATESSAGMDLRAALEAPMTLQPGDAALIPSGIAIHLADPQLCAVILPRSGLGHR HGIVLGNGTGLIDADYQGPLLISTWNRGREAFTIEPGDRIAQLVILPIVRAGLQVVDTFVDSARGAGGFGHTGVR >Mature_154_residues STPTQSLQVKLLDPRFGDLWPLPAYATESSAGMDLRAALEAPMTLQPGDAALIPSGIAIHLADPQLCAVILPRSGLGHRH GIVLGNGTGLIDADYQGPLLISTWNRGREAFTIEPGDRIAQLVILPIVRAGLQVVDTFVDSARGAGGFGHTGVR
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI4503423, Length=151, Percent_Identity=35.0993377483444, Blast_Score=84, Evalue=7e-17, Organism=Homo sapiens, GI70906444, Length=145, Percent_Identity=35.8620689655172, Blast_Score=83, Evalue=8e-17, Organism=Homo sapiens, GI70906441, Length=151, Percent_Identity=35.0993377483444, Blast_Score=82, Evalue=2e-16, Organism=Escherichia coli, GI1790071, Length=148, Percent_Identity=59.4594594594595, Blast_Score=195, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71988561, Length=150, Percent_Identity=34.6666666666667, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6319729, Length=84, Percent_Identity=47.6190476190476, Blast_Score=75, Evalue=4e-15, Organism=Drosophila melanogaster, GI19921126, Length=132, Percent_Identity=31.8181818181818, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24583610, Length=132, Percent_Identity=31.8181818181818, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 16298; Mature: 16167
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPTQSLQVKLLDPRFGDLWPLPAYATESSAGMDLRAALEAPMTLQPGDAALIPSGIAI CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEHHHCCCCEECCCCCEEECCCEEE HLADPQLCAVILPRSGLGHRHGIVLGNGTGLIDADYQGPLLISTWNRGREAFTIEPGDRI EECCCCEEEEEECCCCCCCCCCEEEECCCEEEECCCCCCEEEEECCCCCEEEEECCCHHH AQLVILPIVRAGLQVVDTFVDSARGAGGFGHTGVR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure STPTQSLQVKLLDPRFGDLWPLPAYATESSAGMDLRAALEAPMTLQPGDAALIPSGIAI CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEHHHCCCCEECCCCCEEECCCEEE HLADPQLCAVILPRSGLGHRHGIVLGNGTGLIDADYQGPLLISTWNRGREAFTIEPGDRI EECCCCEEEEEECCCCCCCCCCEEEECCCEEEECCCCCCEEEEECCCCCEEEEECCCHHH AQLVILPIVRAGLQVVDTFVDSARGAGGFGHTGVR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]