Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622093
Identifier: 84622093
GI number: 84622093
Start: 474175
End: 474828
Strand: Direct
Name: 84622093
Synonym: XOO_0436
Alternate gene names: NA
Gene position: 474175-474828 (Clockwise)
Preceding gene: 84622092
Following gene: 84622094
Centisome position: 9.6
GC content: 65.29
Gene sequence:
>654_bases ATGCGAGGCAGGGTGTTGTGGGGTGTCGTGTGGACAGGGATGTTGTTGATCGCGATTGCCCAGGCAGGCAGGGCCGAGCC GGCCCAGCCTGCAGCGTGCAGCTACGATCGCACGGCAATGCTGGCGCTGGATCAAGACGCCTTCGATCAGGACCTGCAGG GCGGCTGGCGCACGATTGCCGACCGCCCCGGCTGCACCCTGGCAGCCGCGGATCTGTTACGCGACTACCGCCAGGCGCAC GCGATCACCGGCGGCATCGTGGTTTGGCACGAAGGTCAGATGCGTGCAGAGGCCGGTCAAACGGCGCAGGCGATCGCCCT GTTCGAAAAATCTTACAAGCCAGCCGCAGAGGACCTCGCCGGCTGGAATCGGTATGTGGATGCGATGATCGCCTTCCTCA AACGCGACCGCGCCGGTCTGGATGCCGCACGCGCACGGCTTGCGGTGGTCCCGTATCCGAAGGGCGAGGGCATGCCGCCG TTGCAGGATGGCTATAGGGTTCTGCCGGCCACGGCCGGCCATCCCGAGATACGCGCGCGCTGGCCGCCCAATCTGGATGT CGTCGATGGCCTGATCAAGTGCTACGACGCGTCCTATTCGGTGGCCTACGGCGCCCAGCGGTGCAGGACATCGACCTCGA CATTGTCAAAGTAG
Upstream 100 bases:
>100_bases TGGACGTCACCGGCTTGGTGATTTATTTCAGCATCGCTGCGCTGATCTTGAGCGGCACGCTGTTGTAGCGTCTGGGTTTC TCCCCGGCAAGGCGATGGCG
Downstream 100 bases:
>100_bases GAAGGCCGCGCCATGCCGGCCGCTGCAGCATGGCGCGGCCGGCATCGCCACGTGCAACCCGCGGTGCGTCAGCAGCCGAG CACATCACCCGTTCGAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MRGRVLWGVVWTGMLLIAIAQAGRAEPAQPAACSYDRTAMLALDQDAFDQDLQGGWRTIADRPGCTLAAADLLRDYRQAH AITGGIVVWHEGQMRAEAGQTAQAIALFEKSYKPAAEDLAGWNRYVDAMIAFLKRDRAGLDAARARLAVVPYPKGEGMPP LQDGYRVLPATAGHPEIRARWPPNLDVVDGLIKCYDASYSVAYGAQRCRTSTSTLSK
Sequences:
>Translated_217_residues MRGRVLWGVVWTGMLLIAIAQAGRAEPAQPAACSYDRTAMLALDQDAFDQDLQGGWRTIADRPGCTLAAADLLRDYRQAH AITGGIVVWHEGQMRAEAGQTAQAIALFEKSYKPAAEDLAGWNRYVDAMIAFLKRDRAGLDAARARLAVVPYPKGEGMPP LQDGYRVLPATAGHPEIRARWPPNLDVVDGLIKCYDASYSVAYGAQRCRTSTSTLSK >Mature_217_residues MRGRVLWGVVWTGMLLIAIAQAGRAEPAQPAACSYDRTAMLALDQDAFDQDLQGGWRTIADRPGCTLAAADLLRDYRQAH AITGGIVVWHEGQMRAEAGQTAQAIALFEKSYKPAAEDLAGWNRYVDAMIAFLKRDRAGLDAARARLAVVPYPKGEGMPP LQDGYRVLPATAGHPEIRARWPPNLDVVDGLIKCYDASYSVAYGAQRCRTSTSTLSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23634; Mature: 23634
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRVLWGVVWTGMLLIAIAQAGRAEPAQPAACSYDRTAMLALDQDAFDQDLQGGWRTIA CCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCHHHHC DRPGCTLAAADLLRDYRQAHAITGGIVVWHEGQMRAEAGQTAQAIALFEKSYKPAAEDLA CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHHCCCCHHHHHH GWNRYVDAMIAFLKRDRAGLDAARARLAVVPYPKGEGMPPLQDGYRVLPATAGHPEIRAR HHHHHHHHHHHHHHHCCCCCHHHHHEEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEC WPPNLDVVDGLIKCYDASYSVAYGAQRCRTSTSTLSK CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MRGRVLWGVVWTGMLLIAIAQAGRAEPAQPAACSYDRTAMLALDQDAFDQDLQGGWRTIA CCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCHHHHC DRPGCTLAAADLLRDYRQAHAITGGIVVWHEGQMRAEAGQTAQAIALFEKSYKPAAEDLA CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHHCCCCHHHHHH GWNRYVDAMIAFLKRDRAGLDAARARLAVVPYPKGEGMPPLQDGYRVLPATAGHPEIRAR HHHHHHHHHHHHHHHCCCCCHHHHHEEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEC WPPNLDVVDGLIKCYDASYSVAYGAQRCRTSTSTLSK CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA