Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is yfiQ [H]
Identifier: 84622094
GI number: 84622094
Start: 475115
End: 477823
Strand: Direct
Name: yfiQ [H]
Synonym: XOO_0437
Alternate gene names: 84622094
Gene position: 475115-477823 (Clockwise)
Preceding gene: 84622093
Following gene: 84622095
Centisome position: 9.62
GC content: 69.36
Gene sequence:
>2709_bases ATGAGTACGTACCACCTGCAGCAGGTTTTTCGTCCCGGCACCGTGGCGGTGGTGGGCGGCAGCCCGCGCGATCGCTCGGC CGGGCGGGCGGTGGTGCGCAATCTGCGCGCGGCGGGTTTTCCCGGGCAGATCGGCTGGGTGAGCCCGCGCTACAGCGAGA TCGACGGCGTACGCACGGTGGCGCGGTTGACCGATCTGCCGTGGGTGCCGGACCTGGTGGTGATCACCGCGCCGGCGCGC ATCGTGCCGCGCATCGTCTCCATCGCCGCGCGGCGTGGCGTGGCCGCGGCGATCATCCTCACCGCAGGTTTAGGGCGTGG CCCCGGTTCGCCGGCTGCGCGCATGGAAGCGGCCGCACGTGCCAAAGGCATGCGCATCCTCGGCCCGCACTGCCTGGGCG TGATCGCCCCGCATGCGCGGCTCAATGCCAGCATCGCCGCGCATTGCCCGCAGGCCGGCGATCTGGCGTTGATTTCCGAA TCCAGCGCCATTGCCGCCGCGCTGGTGGAGTGGGGCGTGGCGCGCTCGGTGGGGTTTTCGGCAGTGGTGTCGCTGGGCGA CACGCTGGATGTGGACTTCGGCGATCTGCTCGATTATTTCGCTACCGACTATCGCACCCGCGCGATCCTGCTCTACGTCG AACGCATCGGCGATGCGCGCAAATTCATGTCGGCCGCACGCGCCGCCGCGCGCGCCAAACCGGTGGTGGTGGTCAAGTCC GGCCGCCAGTTCCGCATCAACCCGAATGCGGATACCCACGCGCAGGCGCTGGCCGGTTCGGATGCGGTGTACGGCGCGGC GTTCGCACGTGCCGGCCTGTTGCGCGTGGGCGCGCTGGACGAGCTGTTCGCCGCTGCCGAAACGCTGGGCCGGCTCGGCA GTTTCCCCGGCCGGCGCCTGGCCATCCTGAGCAATGGTGGCGGGGTGGGGCAGCTGGCGGTGGATCAACTGGTGTTGCGC GGCGGCACCCTGGCCGGGTTGTCGCCCAAGACGCTGGAAAAGCTCGATCAGTCGCTGCCGGAAGGCTGGTCGCGCAGCAA CCCGGTCGACATCATTGTCGACGCTGATGGCGCGCGCTATGCCGCGGCGATCGAATCCTTGCTCGACGACCCGGAAAACG ACGCGCTGCTGGTGGTCAACGTGCCCACCGCCTTCACTTCGTCGGCCGATGCGGCCAAGGCGCTGACCCGCGCGCTGGAC CAACGCAACCGCTACCAGCGCGATAAACCGGTGTTTGCGGTGTGGCTGGGCCAGGACGACGCGGCGATCGCCGCGCTCAA CGCCGCGCGCGTGCCCACTTACGCCACCGAATCGGACGCGGTACGCGGCTTCACCCATCTGGTGCGCTACCGCGAGGCGC AGGCGGCGTTGATGGAAACCCCGCCCAGCCTGCCGGAAGACTTCGTGGTGGATGCCGGCATCGCGCGCGCGGTGGTCGAC GAAGCCCTCACTGCCGGCCGGCGTTGGCTGGACCCGGTCGCGACCAATCGCCTGCTCGCCGCCTACGGCATCCCGATCGT GCCACTGCAGGTGGCAGCCACCGTCAACGAGGCCGCATTGCTGGCCGACCCGCTACTGGCGGTCGGCCGCACGGTCACCT TGAAGGTGTTGTCCAGCGAGATCGCGCACAAGTCCGATGTGGGCGGTGTGCGCCTGAATTTCTCCAGTGTCGCTGCGGTG CGCGAAGCGGCCACCGGCATCCTGGCGCGTGCGCGCGGCGCGCATCCCAGCGCGGTGATCGAAGGGCTGATCGTGCAGCC CACCGTGCTGCGGCCGAAGGCGCGCGAACTGATCGCCGGCATCGCCGACGACCCGGTGTTCGGCCCGGCGATCGTGTTCG GGCGCGGCGGCACCGCGGTTGAAGTCATCAACGACCGCGAGCTCGCGCTGCCACCGTTGGACCTGCGCCTGGCCCACGAG CTGATCGGCCGAACCCGCGTCTCGCGCATTCTCAAGGCCTACCGCGACGTGCCGGCCGCCGACGAGCGCGCGGTGGCGCT GGTGCTTGTCAAGCTGGCGCAGCTGGCCGCCGACATCCCCGAAATCACCGAGCTGGACATCAACCCGCTGCTGGCCGACC GCGACGGTGTGATCGCGCTGGACGCCCGTGTGGCGGTGGCGCCGGCGCGCAAGCTGCACAAGGGGCGCGGCCATCCGCGC TTTGCCATTTTCCCATACCCCAAGGAATGGGAGCGCCAGATCGGCCTGGGCGATGGCACACACGCGCTGGTGCGCCCGGT GCGCCCGGAAGACGATGCGCTGTTCCGCGCCTTCTTCGCCCGCGTCACCGACGAAGACCTGCGGCTGCGCTTCTTCCAGT CGGTGAAGCATTTCAGCCACGAATTCATCGCCCGGCTGACCCAGCTCGACTACGCCCGTTCGATCGCGCTGGTGGCCATC GCCCCCAAGACCGGCGACATGCTGGGGGCGGTGCGCCTGCACGCCGACGCCGATTACGAGCGCGGCGAGTACGGCATCCT GATCCGCTCCGACCTCAAGGGCCACGGCATCGGCTGGCAGCTGATGCGCATCATGATCGAGTACGCGCGCTGGCTGGGCC TCAAACAGATCGAAGGCCAGGTGCTGCGCGAAAACCGCACCATGCTGGCGATGTGCCAGAGCCTGGGCTTCGGTGTACGC CCGGATCCGGACGATGCGACCCTGATGGCGGTGACACTCCCTATAATGGGCGAGCCGCGCCCGGCCTGA
Upstream 100 bases:
>100_bases CTGGCAGCCGTCACAGTCATCGCGCCTTCGCCCATGTCACCCATGCCCTGAAATGCCAGTGCGTGTACCGTAGCGCGATG GCATTCGCGTCCCCGGTCCG
Downstream 100 bases:
>100_bases CGTCGTGTCACGCCGCGGTCCCCCATCCTCCATCGCACGCCGGATCTGCCGGGCCTCGCCCTGGCCCGTTGTTCCGGCTG TCGTCTCGGCCCGCCTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 902; Mature: 901
Protein sequence:
>902_residues MSTYHLQQVFRPGTVAVVGGSPRDRSAGRAVVRNLRAAGFPGQIGWVSPRYSEIDGVRTVARLTDLPWVPDLVVITAPAR IVPRIVSIAARRGVAAAIILTAGLGRGPGSPAARMEAAARAKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISE SSAIAAALVEWGVARSVGFSAVVSLGDTLDVDFGDLLDYFATDYRTRAILLYVERIGDARKFMSAARAAARAKPVVVVKS GRQFRINPNADTHAQALAGSDAVYGAAFARAGLLRVGALDELFAAAETLGRLGSFPGRRLAILSNGGGVGQLAVDQLVLR GGTLAGLSPKTLEKLDQSLPEGWSRSNPVDIIVDADGARYAAAIESLLDDPENDALLVVNVPTAFTSSADAAKALTRALD QRNRYQRDKPVFAVWLGQDDAAIAALNAARVPTYATESDAVRGFTHLVRYREAQAALMETPPSLPEDFVVDAGIARAVVD EALTAGRRWLDPVATNRLLAAYGIPIVPLQVAATVNEAALLADPLLAVGRTVTLKVLSSEIAHKSDVGGVRLNFSSVAAV REAATGILARARGAHPSAVIEGLIVQPTVLRPKARELIAGIADDPVFGPAIVFGRGGTAVEVINDRELALPPLDLRLAHE LIGRTRVSRILKAYRDVPAADERAVALVLVKLAQLAADIPEITELDINPLLADRDGVIALDARVAVAPARKLHKGRGHPR FAIFPYPKEWERQIGLGDGTHALVRPVRPEDDALFRAFFARVTDEDLRLRFFQSVKHFSHEFIARLTQLDYARSIALVAI APKTGDMLGAVRLHADADYERGEYGILIRSDLKGHGIGWQLMRIMIEYARWLGLKQIEGQVLRENRTMLAMCQSLGFGVR PDPDDATLMAVTLPIMGEPRPA
Sequences:
>Translated_902_residues MSTYHLQQVFRPGTVAVVGGSPRDRSAGRAVVRNLRAAGFPGQIGWVSPRYSEIDGVRTVARLTDLPWVPDLVVITAPAR IVPRIVSIAARRGVAAAIILTAGLGRGPGSPAARMEAAARAKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISE SSAIAAALVEWGVARSVGFSAVVSLGDTLDVDFGDLLDYFATDYRTRAILLYVERIGDARKFMSAARAAARAKPVVVVKS GRQFRINPNADTHAQALAGSDAVYGAAFARAGLLRVGALDELFAAAETLGRLGSFPGRRLAILSNGGGVGQLAVDQLVLR GGTLAGLSPKTLEKLDQSLPEGWSRSNPVDIIVDADGARYAAAIESLLDDPENDALLVVNVPTAFTSSADAAKALTRALD QRNRYQRDKPVFAVWLGQDDAAIAALNAARVPTYATESDAVRGFTHLVRYREAQAALMETPPSLPEDFVVDAGIARAVVD EALTAGRRWLDPVATNRLLAAYGIPIVPLQVAATVNEAALLADPLLAVGRTVTLKVLSSEIAHKSDVGGVRLNFSSVAAV REAATGILARARGAHPSAVIEGLIVQPTVLRPKARELIAGIADDPVFGPAIVFGRGGTAVEVINDRELALPPLDLRLAHE LIGRTRVSRILKAYRDVPAADERAVALVLVKLAQLAADIPEITELDINPLLADRDGVIALDARVAVAPARKLHKGRGHPR FAIFPYPKEWERQIGLGDGTHALVRPVRPEDDALFRAFFARVTDEDLRLRFFQSVKHFSHEFIARLTQLDYARSIALVAI APKTGDMLGAVRLHADADYERGEYGILIRSDLKGHGIGWQLMRIMIEYARWLGLKQIEGQVLRENRTMLAMCQSLGFGVR PDPDDATLMAVTLPIMGEPRPA >Mature_901_residues STYHLQQVFRPGTVAVVGGSPRDRSAGRAVVRNLRAAGFPGQIGWVSPRYSEIDGVRTVARLTDLPWVPDLVVITAPARI VPRIVSIAARRGVAAAIILTAGLGRGPGSPAARMEAAARAKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISES SAIAAALVEWGVARSVGFSAVVSLGDTLDVDFGDLLDYFATDYRTRAILLYVERIGDARKFMSAARAAARAKPVVVVKSG RQFRINPNADTHAQALAGSDAVYGAAFARAGLLRVGALDELFAAAETLGRLGSFPGRRLAILSNGGGVGQLAVDQLVLRG GTLAGLSPKTLEKLDQSLPEGWSRSNPVDIIVDADGARYAAAIESLLDDPENDALLVVNVPTAFTSSADAAKALTRALDQ RNRYQRDKPVFAVWLGQDDAAIAALNAARVPTYATESDAVRGFTHLVRYREAQAALMETPPSLPEDFVVDAGIARAVVDE ALTAGRRWLDPVATNRLLAAYGIPIVPLQVAATVNEAALLADPLLAVGRTVTLKVLSSEIAHKSDVGGVRLNFSSVAAVR EAATGILARARGAHPSAVIEGLIVQPTVLRPKARELIAGIADDPVFGPAIVFGRGGTAVEVINDRELALPPLDLRLAHEL IGRTRVSRILKAYRDVPAADERAVALVLVKLAQLAADIPEITELDINPLLADRDGVIALDARVAVAPARKLHKGRGHPRF AIFPYPKEWERQIGLGDGTHALVRPVRPEDDALFRAFFARVTDEDLRLRFFQSVKHFSHEFIARLTQLDYARSIALVAIA PKTGDMLGAVRLHADADYERGEYGILIRSDLKGHGIGWQLMRIMIEYARWLGLKQIEGQVLRENRTMLAMCQSLGFGVRP DPDDATLMAVTLPIMGEPRPA
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=883, Percent_Identity=37.599093997735, Blast_Score=554, Evalue=1e-158,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 96451; Mature: 96320
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYHLQQVFRPGTVAVVGGSPRDRSAGRAVVRNLRAAGFPGQIGWVSPRYSEIDGVRTV CCCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH ARLTDLPWVPDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGRGPGSPAARMEAAAR HHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCCHHHHHHHHH AKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFS HCCCEEECCHHHHHCCCCHHCCCCHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHH AVVSLGDTLDVDFGDLLDYFATDYRTRAILLYVERIGDARKFMSAARAAARAKPVVVVKS HHHHCCCCCCCCHHHHHHHHHHCCCHHEEEEEHHHHCHHHHHHHHHHHHHCCCCEEEEEC GRQFRINPNADTHAQALAGSDAVYGAAFARAGLLRVGALDELFAAAETLGRLGSFPGRRL CCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEE AILSNGGGVGQLAVDQLVLRGGTLAGLSPKTLEKLDQSLPEGWSRSNPVDIIVDADGARY EEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHH AAAIESLLDDPENDALLVVNVPTAFTSSADAAKALTRALDQRNRYQRDKPVFAVWLGQDD HHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC AAIAALNAARVPTYATESDAVRGFTHLVRYREAQAALMETPPSLPEDFVVDAGIARAVVD CCEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH EALTAGRRWLDPVATNRLLAAYGIPIVPLQVAATVNEAALLADPLLAVGRTVTLKVLSSE HHHHHCHHHCCHHHHCCCHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEHHHHHH IAHKSDVGGVRLNFSSVAAVREAATGILARARGAHPSAVIEGLIVQPTVLRPKARELIAG HHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHC IADDPVFGPAIVFGRGGTAVEVINDRELALPPLDLRLAHELIGRTRVSRILKAYRDVPAA CCCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC DERAVALVLVKLAQLAADIPEITELDINPLLADRDGVIALDARVAVAPARKLHKGRGHPR CHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEECCCCEEEEECEEEHHHHHHHHCCCCCCE FAIFPYPKEWERQIGLGDGTHALVRPVRPEDDALFRAFFARVTDEDLRLRFFQSVKHFSH EEEECCCHHHHHHCCCCCCCHHHEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH EFIARLTQLDYARSIALVAIAPKTGDMLGAVRLHADADYERGEYGILIRSDLKGHGIGWQ HHHHHHHHHHHHHCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHH LMRIMIEYARWLGLKQIEGQVLRENRTMLAMCQSLGFGVRPDPDDATLMAVTLPIMGEPR HHHHHHHHHHHCCHHHHCCHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCC PA CC >Mature Secondary Structure STYHLQQVFRPGTVAVVGGSPRDRSAGRAVVRNLRAAGFPGQIGWVSPRYSEIDGVRTV CCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH ARLTDLPWVPDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGRGPGSPAARMEAAAR HHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCCHHHHHHHHH AKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFS HCCCEEECCHHHHHCCCCHHCCCCHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHH AVVSLGDTLDVDFGDLLDYFATDYRTRAILLYVERIGDARKFMSAARAAARAKPVVVVKS HHHHCCCCCCCCHHHHHHHHHHCCCHHEEEEEHHHHCHHHHHHHHHHHHHCCCCEEEEEC GRQFRINPNADTHAQALAGSDAVYGAAFARAGLLRVGALDELFAAAETLGRLGSFPGRRL CCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEE AILSNGGGVGQLAVDQLVLRGGTLAGLSPKTLEKLDQSLPEGWSRSNPVDIIVDADGARY EEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHH AAAIESLLDDPENDALLVVNVPTAFTSSADAAKALTRALDQRNRYQRDKPVFAVWLGQDD HHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC AAIAALNAARVPTYATESDAVRGFTHLVRYREAQAALMETPPSLPEDFVVDAGIARAVVD CCEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH EALTAGRRWLDPVATNRLLAAYGIPIVPLQVAATVNEAALLADPLLAVGRTVTLKVLSSE HHHHHCHHHCCHHHHCCCHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEHHHHHH IAHKSDVGGVRLNFSSVAAVREAATGILARARGAHPSAVIEGLIVQPTVLRPKARELIAG HHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHC IADDPVFGPAIVFGRGGTAVEVINDRELALPPLDLRLAHELIGRTRVSRILKAYRDVPAA CCCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC DERAVALVLVKLAQLAADIPEITELDINPLLADRDGVIALDARVAVAPARKLHKGRGHPR CHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEECCCCEEEEECEEEHHHHHHHHCCCCCCE FAIFPYPKEWERQIGLGDGTHALVRPVRPEDDALFRAFFARVTDEDLRLRFFQSVKHFSH EEEECCCHHHHHHCCCCCCCHHHEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH EFIARLTQLDYARSIALVAIAPKTGDMLGAVRLHADADYERGEYGILIRSDLKGHGIGWQ HHHHHHHHHHHHHCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHH LMRIMIEYARWLGLKQIEGQVLRENRTMLAMCQSLGFGVRPDPDDATLMAVTLPIMGEPR HHHHHHHHHHHCCHHHHCCHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCC PA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]