Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622092
Identifier: 84622092
GI number: 84622092
Start: 472775
End: 474142
Strand: Direct
Name: 84622092
Synonym: XOO_0435
Alternate gene names: NA
Gene position: 472775-474142 (Clockwise)
Preceding gene: 84622090
Following gene: 84622093
Centisome position: 9.57
GC content: 65.35
Gene sequence:
>1368_bases ATGTACGACGAAACCCTGCGCCTTGCCGAAGGCGTCGATGCGCTGACTGCACCCCTGGCCGAGCTCAACACGGCCGATGC GGTGGAATATCTCAACACCCTCGACCGCGATGAAGCGGCGCAGGTGCTGGCCGCGCTGGCGCAGCCGCGTGCAGTGAAAT TGCTCGAACAGCCCGAGCTGCACGATGCCAGCGCGCTGATCGCGCAACTGCCGGCCGAACAGGCTGCCTCGCTGCTCGGG CAGATGGCCGACGACCGCGCCACCGACATCTTTCACGGCCTGGATGCCGAGCAGCGCCAGCCGCTGCTGTGGCTGCTCAG CGCCGAGGCGCGGCTGTCGATCCAGGCATTGATGCGCTACCCGCCCAATACGGCTGGCGCGCTGATGACCACCGAGTTTG TCGCCGTGCCGTCCGATTGGACGGTGGGCCGCACCCTGCAGCACATCCGCGAAGTGGAGCGCAGCCGCGAGACCGTTTAC GCGATCTATCTGCTCGACCCGCACACCCGCGTGCTGCAGCAGGTGGTGACCATGCGCCGGCTGATCACCGGCGCGCCGGA GGCACCGATCCTGGACGTGGCGCAGGTCAACCCGCCGGTCACCGTGGACCCGGCACTGGATCAGGAAGAAGTGGCGCGGC TGATCCGTCGCCACGACCTGCTCGCCATCCCGGTGGTGGATAGGCGCGGCCACGTGCTCGGCATCGTCACCGTGGACGAT GTGCTCGATGCGCTCATCGCCGAATCCACCGAAGACGTGCACAAGTTCGGCGGCATGGAAGCGTTGGACAAGCCGTACAT GCAGATTGGCTTCGGCCAGATGATCAAGAAGCGCGCCGGCTGGTTGAGCGTGCTGTTTCTGGGCGAAATGCTCACCGCCA GCGCAATGCAGCACTTCGAGGACGAGCTGTCCAAGGCGGTGGTGCTGACCTTGTTCATTCCGCTGATCATGAGCTCGGGC GGCAATTCCGGCTCGCAGGCCACCTCGCTGCTGATCCGCTCGCTGGCGCTGCGCGAACTGCGCCTGGGCGACTGGTGGAA AGTGGCGTTGCGCGAATTGCCCACCGGCCTGACCCTGGGTGCGATCCTGGGCGTGCTGGCGATCGTGCGCATCACCATCT GGCAGACCGCCGGCCTGTACGACTACGGCCCGCACTGGCAGATGGTGGCATTGACCATCGGCGCGGCGCTGATCGGCATC GTCACCTTCGGTTCGTTGTCCGGCTCGATGCTGCCGTTCGTGTTGCAACGCTTCGGCTTCGACCCGGCAAGTGCTTCGGC GCCATTTGTTGCGACGTTGGTGGACGTCACCGGCTTGGTGATTTATTTCAGCATCGCTGCGCTGATCTTGAGCGGCACGC TGTTGTAG
Upstream 100 bases:
>100_bases GACAGTCACCCTAGACCCGGGTCGATGACCCAGCTGGCGCGCGCCTGAGGCTCAGGTTCGCTGGCTGTCATCGACGACGG TCGTCACCAGGCGAACCACC
Downstream 100 bases:
>100_bases CGTCTGGGTTTCTCCCCGGCAAGGCGATGGCGATGCGAGGCAGGGTGTTGTGGGGTGTCGTGTGGACAGGGATGTTGTTG ATCGCGATTGCCCAGGCAGG
Product: Mg++ transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MYDETLRLAEGVDALTAPLAELNTADAVEYLNTLDRDEAAQVLAALAQPRAVKLLEQPELHDASALIAQLPAEQAASLLG QMADDRATDIFHGLDAEQRQPLLWLLSAEARLSIQALMRYPPNTAGALMTTEFVAVPSDWTVGRTLQHIREVERSRETVY AIYLLDPHTRVLQQVVTMRRLITGAPEAPILDVAQVNPPVTVDPALDQEEVARLIRRHDLLAIPVVDRRGHVLGIVTVDD VLDALIAESTEDVHKFGGMEALDKPYMQIGFGQMIKKRAGWLSVLFLGEMLTASAMQHFEDELSKAVVLTLFIPLIMSSG GNSGSQATSLLIRSLALRELRLGDWWKVALRELPTGLTLGAILGVLAIVRITIWQTAGLYDYGPHWQMVALTIGAALIGI VTFGSLSGSMLPFVLQRFGFDPASASAPFVATLVDVTGLVIYFSIAALILSGTLL
Sequences:
>Translated_455_residues MYDETLRLAEGVDALTAPLAELNTADAVEYLNTLDRDEAAQVLAALAQPRAVKLLEQPELHDASALIAQLPAEQAASLLG QMADDRATDIFHGLDAEQRQPLLWLLSAEARLSIQALMRYPPNTAGALMTTEFVAVPSDWTVGRTLQHIREVERSRETVY AIYLLDPHTRVLQQVVTMRRLITGAPEAPILDVAQVNPPVTVDPALDQEEVARLIRRHDLLAIPVVDRRGHVLGIVTVDD VLDALIAESTEDVHKFGGMEALDKPYMQIGFGQMIKKRAGWLSVLFLGEMLTASAMQHFEDELSKAVVLTLFIPLIMSSG GNSGSQATSLLIRSLALRELRLGDWWKVALRELPTGLTLGAILGVLAIVRITIWQTAGLYDYGPHWQMVALTIGAALIGI VTFGSLSGSMLPFVLQRFGFDPASASAPFVATLVDVTGLVIYFSIAALILSGTLL >Mature_455_residues MYDETLRLAEGVDALTAPLAELNTADAVEYLNTLDRDEAAQVLAALAQPRAVKLLEQPELHDASALIAQLPAEQAASLLG QMADDRATDIFHGLDAEQRQPLLWLLSAEARLSIQALMRYPPNTAGALMTTEFVAVPSDWTVGRTLQHIREVERSRETVY AIYLLDPHTRVLQQVVTMRRLITGAPEAPILDVAQVNPPVTVDPALDQEEVARLIRRHDLLAIPVVDRRGHVLGIVTVDD VLDALIAESTEDVHKFGGMEALDKPYMQIGFGQMIKKRAGWLSVLFLGEMLTASAMQHFEDELSKAVVLTLFIPLIMSSG GNSGSQATSLLIRSLALRELRLGDWWKVALRELPTGLTLGAILGVLAIVRITIWQTAGLYDYGPHWQMVALTIGAALIGI VTFGSLSGSMLPFVLQRFGFDPASASAPFVATLVDVTGLVIYFSIAALILSGTLL
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 49493; Mature: 49493
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDETLRLAEGVDALTAPLAELNTADAVEYLNTLDRDEAAQVLAALAQPRAVKLLEQPEL CCCHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCCCC HDASALIAQLPAEQAASLLGQMADDRATDIFHGLDAEQRQPLLWLLSAEARLSIQALMRY CHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHC PPNTAGALMTTEFVAVPSDWTVGRTLQHIREVERSRETVYAIYLLDPHTRVLQQVVTMRR CCCCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHH LITGAPEAPILDVAQVNPPVTVDPALDQEEVARLIRRHDLLAIPVVDRRGHVLGIVTVDD HHCCCCCCCCEEHHCCCCCEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCEEEEEEHHH VLDALIAESTEDVHKFGGMEALDKPYMQIGFGQMIKKRAGWLSVLFLGEMLTASAMQHFE HHHHHHHCCHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DELSKAVVLTLFIPLIMSSGGNSGSQATSLLIRSLALRELRLGDWWKVALRELPTGLTLG HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHH AILGVLAIVRITIWQTAGLYDYGPHWQMVALTIGAALIGIVTFGSLSGSMLPFVLQRFGF HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC DPASASAPFVATLVDVTGLVIYFSIAALILSGTLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYDETLRLAEGVDALTAPLAELNTADAVEYLNTLDRDEAAQVLAALAQPRAVKLLEQPEL CCCHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCCCC HDASALIAQLPAEQAASLLGQMADDRATDIFHGLDAEQRQPLLWLLSAEARLSIQALMRY CHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHC PPNTAGALMTTEFVAVPSDWTVGRTLQHIREVERSRETVYAIYLLDPHTRVLQQVVTMRR CCCCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHH LITGAPEAPILDVAQVNPPVTVDPALDQEEVARLIRRHDLLAIPVVDRRGHVLGIVTVDD HHCCCCCCCCEEHHCCCCCEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCEEEEEEHHH VLDALIAESTEDVHKFGGMEALDKPYMQIGFGQMIKKRAGWLSVLFLGEMLTASAMQHFE HHHHHHHCCHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DELSKAVVLTLFIPLIMSSGGNSGSQATSLLIRSLALRELRLGDWWKVALRELPTGLTLG HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHH AILGVLAIVRITIWQTAGLYDYGPHWQMVALTIGAALIGIVTFGSLSGSMLPFVLQRFGF HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC DPASASAPFVATLVDVTGLVIYFSIAALILSGTLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA