Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is yedA [C]

Identifier: 84622062

GI number: 84622062

Start: 437676

End: 438074

Strand: Direct

Name: yedA [C]

Synonym: XOO_0405

Alternate gene names: 84622062

Gene position: 437676-438074 (Clockwise)

Preceding gene: 84622060

Following gene: 84622063

Centisome position: 8.86

GC content: 67.17

Gene sequence:

>399_bases
ATGTCTTCCTCTCACGATGCTGCCGCGCCTGCGCGCAGCGGGTTAGTCGTTCTCGCCGTGTTGCTGGTCTACGTGGTGTG
GGGCTCGACCTATCTGGCGATCCGCGTTGCGCTGGAAAGTGGTGCGCAGCCGCTGACGATGGTGTCCGGCATACGTTTCA
TCGTCGCCGGTAGCGTGCTCTACAGCGTGCTGCGCTGGCGCAGTGTGGCTGCGCCCACGCGCGCGCAATGGAAGAACGTG
GCGCTGATGGGCGCGGCATTGTTGCTGCTGGGCAACGGTATGGTGGTGTCGGCCGGGCGCAGCGTGTCGTCCGGGCTGGC
CGCCACGGCGGTGGCGACGGTGCCGTCGGTGCATTGCGCGGGCAGCATGCCAGCGGCGGCGAATGGTTGGGCATTGTGA

Upstream 100 bases:

>100_bases
TGCACCATAGCGCGATAGACGGCTGCCGGTTGTGTGCGACGAGGGCGTGTGCATGTGCTCTAGAATTGAGGTTTCCGCTG
TACTGCCCGGCACGATTCCG

Downstream 100 bases:

>100_bases
TCGGCTTTGTGGGCATGGTGTGGTTCAACGCCAGCACCCGTTTGACCGCGACGCCGGGTGGGTTGGTGTTGCTGCTGATC
GCACCGATCGGCTGGGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSSSHDAAAPARSGLVVLAVLLVYVVWGSTYLAIRVALESGAQPLTMVSGIRFIVAGSVLYSVLRWRSVAAPTRAQWKNV
ALMGAALLLLGNGMVVSAGRSVSSGLAATAVATVPSVHCAGSMPAAANGWAL

Sequences:

>Translated_132_residues
MSSSHDAAAPARSGLVVLAVLLVYVVWGSTYLAIRVALESGAQPLTMVSGIRFIVAGSVLYSVLRWRSVAAPTRAQWKNV
ALMGAALLLLGNGMVVSAGRSVSSGLAATAVATVPSVHCAGSMPAAANGWAL
>Mature_131_residues
SSSHDAAAPARSGLVVLAVLLVYVVWGSTYLAIRVALESGAQPLTMVSGIRFIVAGSVLYSVLRWRSVAAPTRAQWKNVA
LMGAALLLLGNGMVVSAGRSVSSGLAATAVATVPSVHCAGSMPAAANGWAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13377; Mature: 13246

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSHDAAAPARSGLVVLAVLLVYVVWGSTYLAIRVALESGAQPLTMVSGIRFIVAGSVL
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHEEHHHCCCCCHHHHHHHHHHHHHHHH
YSVLRWRSVAAPTRAQWKNVALMGAALLLLGNGMVVSAGRSVSSGLAATAVATVPSVHCA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCC
GSMPAAANGWAL
CCCCCCCCCCCC
>Mature Secondary Structure 
SSSHDAAAPARSGLVVLAVLLVYVVWGSTYLAIRVALESGAQPLTMVSGIRFIVAGSVL
CCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHEEHHHCCCCCHHHHHHHHHHHHHHHH
YSVLRWRSVAAPTRAQWKNVALMGAALLLLGNGMVVSAGRSVSSGLAATAVATVPSVHCA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCC
GSMPAAANGWAL
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA