Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is ycbL [C]
Identifier: 84622059
GI number: 84622059
Start: 433499
End: 434515
Strand: Direct
Name: ycbL [C]
Synonym: XOO_0402
Alternate gene names: 84622059
Gene position: 433499-434515 (Clockwise)
Preceding gene: 84622058
Following gene: 84622060
Centisome position: 8.77
GC content: 63.91
Gene sequence:
>1017_bases GTGGCGACATGCATCACAGCGACGCAATGCTTGGGCCTACACTGCAGTCTCTACAACCGCCGCGGGGTGCGAATGACAGT GACAGCCGAGTTCAACATCCACACCATCGATACCGGCTTTGGTGGTGTGCAATTCGATGCAGCGTATTTGATCGTCCAAG CGCAACGCGGCGCCTTGATCGATTGCGGCACCTCGCTGTCGGTGCCACAGATGCTGGCCGCGGTGCAGGCGGCCGGGTTG GCGCCGGCGCAGATAGAGTGGTTGATCCTGACCCATGTACATCTGGATCATGCCGGCGGTGCCGGGACCTTGTTGCAGCA CCTGCCCAATGCGCAGGCGCTGGTGCATCCGCGCGGTGCACCGCATCTGATCGACCCCACACGGCTGATTGCCGGCGCCA CCGCGGTGTATGGCGAGGCGGAAATGGCGCGCAGTTACGGTGTCATTGCGCCGGTGCCGGCCGAGCGCGTGGTCGAGGCG GTCGATGGGTACACGGTGATGCTGGGCGCGCGCGCGCTGCGCACGATCGATACCCCGGGGCATGCACGCCATCATCTGTG CGTGTGGGATGCGCGTAGCCGCAGCTGGTTTACCGGTGATACCTTCGGCCTGTCGTATCGGCAACTGGACAGTGCCCGGG GTGCCTTCATCCTGCCCACCTCGTCGCCGGTACAGTTCGAGCCCGAGGCGATGCTGCAGTCGATGACGCGCCTGATGGAC GCCGCACCGGAGGCGATGTATCTCACCCATTACGGCCGTGTCACATCGCCGGCACCGTTGGCGCAGGCGCTAGGCGAGCA GATTCATGCGATGACCGAGATTGCGCTGGGTTGCGCGCAACGTCCGGACCGGCATCGCTGCATGGTGGCGGCGTTGACCG AATTGTATTTGGAACGCGCACGCCAGCATGGATGTCGGTTGGACGATGCGGCCGTGGAGCAACTGCTGGCAACGGATATC GAACTCAACGCGCAAGGGCTGGGGTTTTGGCTGGATCGTGCAGCGCGACCAAGTTAG
Upstream 100 bases:
>100_bases GACGTGATTCTTGCGGCGATGCACGCATTGCGCGAGGCATGATCGACATGACGCTGCAGGCGTCGCTGTTCGCCATGGCT AGCCGCATTCTGGGGTGCCT
Downstream 100 bases:
>100_bases CGCTCCGGGAGCGGCTGATATGTCCTCTCGACCGCTGTAGCGAATTGTCACGTCGTTTAAAGCCAGTCAGTCGAATGCGC GGTGCCCTCGCCGCTTGCAG
Product: beta-lactamase related protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like Protein; Zn-Dependent Hydrolase; Beta-Lactamase Related Protein; Beta-Lactamase-Like; Metallo-Beta-Lactamase Family Hydrolase; Metallo-Beta-Lactamase-Related Protein; Zn-Dependent Hydrolase Including Glyoxylase; Metallo Beta-Lactamase Protein; Zn-Dependent Hydrolase Glyoxylase; Metallo-Beta-Lactamase Domain Protein; Hydrolase; Metallo-Beta-Lactamase; Zn-Dependent Hydrolases Including Glyoxylases; Hydroxyacylglutathione Hydrolase; Zinc-Dependant Hydrolase; Metallo-Beta-Lactamase Related Protein
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MATCITATQCLGLHCSLYNRRGVRMTVTAEFNIHTIDTGFGGVQFDAAYLIVQAQRGALIDCGTSLSVPQMLAAVQAAGL APAQIEWLILTHVHLDHAGGAGTLLQHLPNAQALVHPRGAPHLIDPTRLIAGATAVYGEAEMARSYGVIAPVPAERVVEA VDGYTVMLGARALRTIDTPGHARHHLCVWDARSRSWFTGDTFGLSYRQLDSARGAFILPTSSPVQFEPEAMLQSMTRLMD AAPEAMYLTHYGRVTSPAPLAQALGEQIHAMTEIALGCAQRPDRHRCMVAALTELYLERARQHGCRLDDAAVEQLLATDI ELNAQGLGFWLDRAARPS
Sequences:
>Translated_338_residues MATCITATQCLGLHCSLYNRRGVRMTVTAEFNIHTIDTGFGGVQFDAAYLIVQAQRGALIDCGTSLSVPQMLAAVQAAGL APAQIEWLILTHVHLDHAGGAGTLLQHLPNAQALVHPRGAPHLIDPTRLIAGATAVYGEAEMARSYGVIAPVPAERVVEA VDGYTVMLGARALRTIDTPGHARHHLCVWDARSRSWFTGDTFGLSYRQLDSARGAFILPTSSPVQFEPEAMLQSMTRLMD AAPEAMYLTHYGRVTSPAPLAQALGEQIHAMTEIALGCAQRPDRHRCMVAALTELYLERARQHGCRLDDAAVEQLLATDI ELNAQGLGFWLDRAARPS >Mature_337_residues ATCITATQCLGLHCSLYNRRGVRMTVTAEFNIHTIDTGFGGVQFDAAYLIVQAQRGALIDCGTSLSVPQMLAAVQAAGLA PAQIEWLILTHVHLDHAGGAGTLLQHLPNAQALVHPRGAPHLIDPTRLIAGATAVYGEAEMARSYGVIAPVPAERVVEAV DGYTVMLGARALRTIDTPGHARHHLCVWDARSRSWFTGDTFGLSYRQLDSARGAFILPTSSPVQFEPEAMLQSMTRLMDA APEAMYLTHYGRVTSPAPLAQALGEQIHAMTEIALGCAQRPDRHRCMVAALTELYLERARQHGCRLDDAAVEQLLATDIE LNAQGLGFWLDRAARPS
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36535; Mature: 36404
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATCITATQCLGLHCSLYNRRGVRMTVTAEFNIHTIDTGFGGVQFDAAYLIVQAQRGALI CCCEEEHHHHHHHEEEEECCCCEEEEEEEEEEEEEEECCCCCEEEEEEEEEEEECCCCEE DCGTSLSVPQMLAAVQAAGLAPAQIEWLILTHVHLDHAGGAGTLLQHLPNAQALVHPRGA ECCCCCCHHHHHHHHHHCCCCCHHEEEEEEEEEEEECCCCHHHHHHHCCCCCEEECCCCC PHLIDPTRLIAGATAVYGEAEMARSYGVIAPVPAERVVEAVDGYTVMLGARALRTIDTPG CCCCCHHHHHHCCHHHHCCHHHHHHCCCCCCCCHHHHHHHHCCEEEEECHHHHHHCCCCC HARHHLCVWDARSRSWFTGDTFGLSYRQLDSARGAFILPTSSPVQFEPEAMLQSMTRLMD CCCCEEEEEECCCCCEECCCCCCCHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHH AAPEAMYLTHYGRVTSPAPLAQALGEQIHAMTEIALGCAQRPDRHRCMVAALTELYLERA CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RQHGCRLDDAAVEQLLATDIELNAQGLGFWLDRAARPS HHCCCCCCHHHHHHHHHHCCEECCCCCHHHHHCCCCCC >Mature Secondary Structure ATCITATQCLGLHCSLYNRRGVRMTVTAEFNIHTIDTGFGGVQFDAAYLIVQAQRGALI CCEEEHHHHHHHEEEEECCCCEEEEEEEEEEEEEEECCCCCEEEEEEEEEEEECCCCEE DCGTSLSVPQMLAAVQAAGLAPAQIEWLILTHVHLDHAGGAGTLLQHLPNAQALVHPRGA ECCCCCCHHHHHHHHHHCCCCCHHEEEEEEEEEEEECCCCHHHHHHHCCCCCEEECCCCC PHLIDPTRLIAGATAVYGEAEMARSYGVIAPVPAERVVEAVDGYTVMLGARALRTIDTPG CCCCCHHHHHHCCHHHHCCHHHHHHCCCCCCCCHHHHHHHHCCEEEEECHHHHHHCCCCC HARHHLCVWDARSRSWFTGDTFGLSYRQLDSARGAFILPTSSPVQFEPEAMLQSMTRLMD CCCCEEEEEECCCCCEECCCCCCCHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHH AAPEAMYLTHYGRVTSPAPLAQALGEQIHAMTEIALGCAQRPDRHRCMVAALTELYLERA CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RQHGCRLDDAAVEQLLATDIELNAQGLGFWLDRAARPS HHCCCCCCHHHHHHHHHHCCEECCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA