Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489315
Identifier: 84489315
GI number: 84489315
Start: 598137
End: 598787
Strand: Direct
Name: 84489315
Synonym: Msp_0504
Alternate gene names: NA
Gene position: 598137-598787 (Clockwise)
Preceding gene: 84489314
Following gene: 84489317
Centisome position: 33.84
GC content: 28.88
Gene sequence:
>651_bases TTGATTAACATGGATTTAAATTTTGATTTTACAGAAAAAAGAATAATAATTACGTCCTTTTTCTGTGTAGCATTCATAAT TGCAAATCTTATCACAGTTAAAATAATTGATGTTAACTTTTTAGGTATGCAAACTCCTGCTGGAGTACTTATATATCCAT TAATTTATATTTTAACCAATGTGATTACGAATGTTTACGGAGAAAAGGCAGCACAGAGAACATTAATTTTAGGTATTGCA ACAAATGTTTTATTTGTATTTATGACAACATTAATACTAGTATTACCATCACCTAGTTTTTATACTGGTGATTCAAGTCT AGCATTTGTATTTACACAAACTCCTAGAATACTTATAGCATCATACTTCAGTTATCTTATGGGTAACTTAACAACTGCAA AACTCACAACTATTGTAAATAAGGGTAATTCTTTATTACGTGTGAAAAACCTTGGTGCTATTTTCACTGGTGAATTAGTT GATAACATAATATTCATTGGTCTATCATTTATTGGAACTGTGGCTATTGTGGATGTTGTAATAATGATATTCAGTCACTG GATTATTAGTATTGTATGGAACATAATTGCTCAACCATTTACTGAAAAAGTAACATCTTGGGCAAAGAAAGGAAAAGTTG AAGAAATATAA
Upstream 100 bases:
>100_bases TATACTTTTTTTTAAACTAAATCAACTACTCTTATAATTAAACTAATATATCTTTAAATATATAGATTATATTGTCTAAT TAAAAGAAAAAAATGGATTT
Downstream 100 bases:
>100_bases AACTTTTTCCTTCTTTTTTTTAATAAAAAAAATAGTTTTTTTAATTTAAGGTTACATTACCTACATATATTGCATTTTCT GGATTAGATGAAAAGGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MINMDLNFDFTEKRIIITSFFCVAFIIANLITVKIIDVNFLGMQTPAGVLIYPLIYILTNVITNVYGEKAAQRTLILGIA TNVLFVFMTTLILVLPSPSFYTGDSSLAFVFTQTPRILIASYFSYLMGNLTTAKLTTIVNKGNSLLRVKNLGAIFTGELV DNIIFIGLSFIGTVAIVDVVIMIFSHWIISIVWNIIAQPFTEKVTSWAKKGKVEEI
Sequences:
>Translated_216_residues MINMDLNFDFTEKRIIITSFFCVAFIIANLITVKIIDVNFLGMQTPAGVLIYPLIYILTNVITNVYGEKAAQRTLILGIA TNVLFVFMTTLILVLPSPSFYTGDSSLAFVFTQTPRILIASYFSYLMGNLTTAKLTTIVNKGNSLLRVKNLGAIFTGELV DNIIFIGLSFIGTVAIVDVVIMIFSHWIISIVWNIIAQPFTEKVTSWAKKGKVEEI >Mature_216_residues MINMDLNFDFTEKRIIITSFFCVAFIIANLITVKIIDVNFLGMQTPAGVLIYPLIYILTNVITNVYGEKAAQRTLILGIA TNVLFVFMTTLILVLPSPSFYTGDSSLAFVFTQTPRILIASYFSYLMGNLTTAKLTTIVNKGNSLLRVKNLGAIFTGELV DNIIFIGLSFIGTVAIVDVVIMIFSHWIISIVWNIIAQPFTEKVTSWAKKGKVEEI
Specific function: Unknown
COG id: COG1738
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24019; Mature: 24019
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINMDLNFDFTEKRIIITSFFCVAFIIANLITVKIIDVNFLGMQTPAGVLIYPLIYILTN CEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHH VITNVYGEKAAQRTLILGIATNVLFVFMTTLILVLPSPSFYTGDSSLAFVFTQTPRILIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEECCCHHHHH SYFSYLMGNLTTAKLTTIVNKGNSLLRVKNLGAIFTGELVDNIIFIGLSFIGTVAIVDVV HHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IMIFSHWIISIVWNIIAQPFTEKVTSWAKKGKVEEI HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MINMDLNFDFTEKRIIITSFFCVAFIIANLITVKIIDVNFLGMQTPAGVLIYPLIYILTN CEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHH VITNVYGEKAAQRTLILGIATNVLFVFMTTLILVLPSPSFYTGDSSLAFVFTQTPRILIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEECCCHHHHH SYFSYLMGNLTTAKLTTIVNKGNSLLRVKNLGAIFTGELVDNIIFIGLSFIGTVAIVDVV HHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IMIFSHWIISIVWNIIAQPFTEKVTSWAKKGKVEEI HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA