Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489314
Identifier: 84489314
GI number: 84489314
Start: 597397
End: 598014
Strand: Direct
Name: 84489314
Synonym: Msp_0503
Alternate gene names: NA
Gene position: 597397-598014 (Clockwise)
Preceding gene: 84489311
Following gene: 84489315
Centisome position: 33.8
GC content: 23.62
Gene sequence:
>618_bases ATGAAGAAAAAAACTATTGGAATTATATTATTACTAATTATTTTAATAATAGGGTCTTTTTTTCTATATATGGAATATAT GAACTACTGTGATAGGGAAAATTTTAATAAAACAATAAAAACTGTTAGTGATTTTGAAAATAGAACTGATATAAACAGTA TTGCTTTTGTTGATACTAGTCCTGTAACTTTAGATGAAGCAGTATCCTTTGAAAAGAGTTTTAATGAAAATATTACTATT GAAATCAACATATTAAATCAATATAAAAATCAGACAAGTAATAAAACCTATCAAGAGTATGTTGATATAGAAGTTAATCG TTTAATATATGAAAAAAGATCTGCTGAATTGACTCTTGAAATATGTGATTTGTGGAAAAAGGCAAAAACTGGTGAATTAA ATCCATATGATGCATTAAGTAAAGTTAAAGAGATAAACAATCAAAGTACAGAAGTAAATAATAAAGTTAATACAGAAAAG ATAAATGCAATTAATTACTTGGAAAAACATCCAAATCTTAATAAAACATTAACAGATTTAGGAATTGATGAAGACTTTAA TACATATGAGTTAGATGGAGGAGGTCCTAATATTTCCAAATTTAATATTTATTATTAA
Upstream 100 bases:
>100_bases TCTTATGGTTTGAAGAAAAATAAAAGGATATTAAGGAATCTTTTTTTTTAAATTCAATTTTACAATAAAATTATTAATAA TACCAAATATATCTTTCTAT
Downstream 100 bases:
>100_bases AAGTAATATCTATTAATCTTTTTATACTTTTTTTTAAACTAAATCAACTACTCTTATAATTAAACTAATATATCTTTAAA TATATAGATTATATTGTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MKKKTIGIILLLIILIIGSFFLYMEYMNYCDRENFNKTIKTVSDFENRTDINSIAFVDTSPVTLDEAVSFEKSFNENITI EINILNQYKNQTSNKTYQEYVDIEVNRLIYEKRSAELTLEICDLWKKAKTGELNPYDALSKVKEINNQSTEVNNKVNTEK INAINYLEKHPNLNKTLTDLGIDEDFNTYELDGGGPNISKFNIYY
Sequences:
>Translated_205_residues MKKKTIGIILLLIILIIGSFFLYMEYMNYCDRENFNKTIKTVSDFENRTDINSIAFVDTSPVTLDEAVSFEKSFNENITI EINILNQYKNQTSNKTYQEYVDIEVNRLIYEKRSAELTLEICDLWKKAKTGELNPYDALSKVKEINNQSTEVNNKVNTEK INAINYLEKHPNLNKTLTDLGIDEDFNTYELDGGGPNISKFNIYY >Mature_205_residues MKKKTIGIILLLIILIIGSFFLYMEYMNYCDRENFNKTIKTVSDFENRTDINSIAFVDTSPVTLDEAVSFEKSFNENITI EINILNQYKNQTSNKTYQEYVDIEVNRLIYEKRSAELTLEICDLWKKAKTGELNPYDALSKVKEINNQSTEVNNKVNTEK INAINYLEKHPNLNKTLTDLGIDEDFNTYELDGGGPNISKFNIYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23805; Mature: 23805
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKTIGIILLLIILIIGSFFLYMEYMNYCDRENFNKTIKTVSDFENRTDINSIAFVDTS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCC PVTLDEAVSFEKSFNENITIEINILNQYKNQTSNKTYQEYVDIEVNRLIYEKRSAELTLE CCCHHHHHHHHHHCCCCEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHH ICDLWKKAKTGELNPYDALSKVKEINNQSTEVNNKVNTEKINAINYLEKHPNLNKTLTDL HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHC GIDEDFNTYELDGGGPNISKFNIYY CCCCCCCEEEECCCCCCCCEEEECC >Mature Secondary Structure MKKKTIGIILLLIILIIGSFFLYMEYMNYCDRENFNKTIKTVSDFENRTDINSIAFVDTS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCC PVTLDEAVSFEKSFNENITIEINILNQYKNQTSNKTYQEYVDIEVNRLIYEKRSAELTLE CCCHHHHHHHHHHCCCCEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHH ICDLWKKAKTGELNPYDALSKVKEINNQSTEVNNKVNTEKINAINYLEKHPNLNKTLTDL HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHC GIDEDFNTYELDGGGPNISKFNIYY CCCCCCCEEEECCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA