Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489286
Identifier: 84489286
GI number: 84489286
Start: 557996
End: 558508
Strand: Direct
Name: 84489286
Synonym: Msp_0475
Alternate gene names: NA
Gene position: 557996-558508 (Clockwise)
Preceding gene: 84489285
Following gene: 84489287
Centisome position: 31.57
GC content: 21.83
Gene sequence:
>513_bases ATGATAGAATCAGATATTAAACGATATGAACTTTTATTGGATTTGCTACAAAAAAGCAAAAAAGAACAAGATGAACAAAA TAACACATTAGATCAAAAATGTAGTTCTATGATTAATATTTTAATTTTAATCATAACAATACAATGTGGCATTTATGCTA ATGTTGCTTTATTAAACGAAATTGCATCAAGTGAAATAGCGATAATAATCAAAGTGTTATTAATAATAACATTAATTGGT AATTTTATTGCGTTATATTTCTTTATTGCTGCTTATTATTTAAAAGATTTTGAAGGGATGACAAATGAAGAAGATATAAT TAAATATGGAGAAAATAATACAAATCTTGAAACAATATACAAAGAGATATCTGTTGACTATAAAAGAACAATTGAAGAAA ATAAGATAGAATTATCCAAAATAGATAAAATAAAATTAGGATTTAAAATTGTTACTTTAACAACGGGAATCTTTGTATTA ACTATCATTATTTGTTTAGAAATTTTAATTTAA
Upstream 100 bases:
>100_bases ATAACAATTCTGGTTGGACTAGCAATAATAGAAGAAACACAGTAACTAAATCAAACGGCGAAAAATAATAAATAAAATAT AAATATTATTAAGGATACTT
Downstream 100 bases:
>100_bases CATCTTCATTAAATCTTTTTTTTCATTAAACATTATCAGATAATTTAAGTAATAACAGATATGAGATAAATTTGTAGCAC ATTTCACATTTGTGCTACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MIESDIKRYELLLDLLQKSKKEQDEQNNTLDQKCSSMINILILIITIQCGIYANVALLNEIASSEIAIIIKVLLIITLIG NFIALYFFIAAYYLKDFEGMTNEEDIIKYGENNTNLETIYKEISVDYKRTIEENKIELSKIDKIKLGFKIVTLTTGIFVL TIIICLEILI
Sequences:
>Translated_170_residues MIESDIKRYELLLDLLQKSKKEQDEQNNTLDQKCSSMINILILIITIQCGIYANVALLNEIASSEIAIIIKVLLIITLIG NFIALYFFIAAYYLKDFEGMTNEEDIIKYGENNTNLETIYKEISVDYKRTIEENKIELSKIDKIKLGFKIVTLTTGIFVL TIIICLEILI >Mature_170_residues MIESDIKRYELLLDLLQKSKKEQDEQNNTLDQKCSSMINILILIITIQCGIYANVALLNEIASSEIAIIIKVLLIITLIG NFIALYFFIAAYYLKDFEGMTNEEDIIKYGENNTNLETIYKEISVDYKRTIEENKIELSKIDKIKLGFKIVTLTTGIFVL TIIICLEILI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19508; Mature: 19508
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIESDIKRYELLLDLLQKSKKEQDEQNNTLDQKCSSMINILILIITIQCGIYANVALLNE CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IASSEIAIIIKVLLIITLIGNFIALYFFIAAYYLKDFEGMTNEEDIIKYGENNTNLETIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHH KEISVDYKRTIEENKIELSKIDKIKLGFKIVTLTTGIFVLTIIICLEILI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MIESDIKRYELLLDLLQKSKKEQDEQNNTLDQKCSSMINILILIITIQCGIYANVALLNE CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IASSEIAIIIKVLLIITLIGNFIALYFFIAAYYLKDFEGMTNEEDIIKYGENNTNLETIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHH KEISVDYKRTIEENKIELSKIDKIKLGFKIVTLTTGIFVLTIIICLEILI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA