Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489287

Identifier: 84489287

GI number: 84489287

Start: 558611

End: 558835

Strand: Direct

Name: 84489287

Synonym: Msp_0476

Alternate gene names: NA

Gene position: 558611-558835 (Clockwise)

Preceding gene: 84489286

Following gene: 84489289

Centisome position: 31.61

GC content: 29.33

Gene sequence:

>225_bases
TTGTGCTACAATTCCATCGTGTGCCACATCATTTTCCATGATATTTTTGTGCTACATTTCCCTTTTGTACCACATTTTTT
GCCCCTATTTTTGTGCCACAACCTCCATTTGTGCTACAAAAATATTTTTTACTTCGTTATATGTGGATATAACGAATTAA
AAAATCAGAGCTCATCGTTGATGATTATAGAAAAATGTAATTTTAAAAATAGAAATAAAAAATAA

Upstream 100 bases:

>100_bases
TCTTCATTAAATCTTTTTTTTCATTAAACATTATCAGATAATTTAAGTAATAACAGATATGAGATAAATTTGTAGCACAT
TTCACATTTGTGCTACTTTT

Downstream 100 bases:

>100_bases
ATTATCAAATGTGGTGACTTTAACATTTGATTTCCCTTTAACTAAGAATGTTTTCATAAGTACAAAAAAACTTAAAAGGT
TCAAAAATGTTCAATGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MCYNSIVCHIIFHDIFVLHFPFVPHFLPLFLCHNLHLCYKNIFYFVICGYNELKNQSSSLMIIEKCNFKNRNKK

Sequences:

>Translated_74_residues
MCYNSIVCHIIFHDIFVLHFPFVPHFLPLFLCHNLHLCYKNIFYFVICGYNELKNQSSSLMIIEKCNFKNRNKK
>Mature_74_residues
MCYNSIVCHIIFHDIFVLHFPFVPHFLPLFLCHNLHLCYKNIFYFVICGYNELKNQSSSLMIIEKCNFKNRNKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8943; Mature: 8943

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
10.8 %Cys+Met (Translated Protein)
8.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
10.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCYNSIVCHIIFHDIFVLHFPFVPHFLPLFLCHNLHLCYKNIFYFVICGYNELKNQSSSL
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHCCCCCCE
MIIEKCNFKNRNKK
EEEEECCCCCCCCC
>Mature Secondary Structure
MCYNSIVCHIIFHDIFVLHFPFVPHFLPLFLCHNLHLCYKNIFYFVICGYNELKNQSSSL
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHCCCCCCE
MIIEKCNFKNRNKK
EEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA