Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
---|---|
Accession | NC_007681 |
Length | 1,767,403 |
Click here to switch to the map view.
The map label for this gene is 84489285
Identifier: 84489285
GI number: 84489285
Start: 557688
End: 557963
Strand: Direct
Name: 84489285
Synonym: Msp_0474
Alternate gene names: NA
Gene position: 557688-557963 (Clockwise)
Preceding gene: 84489284
Following gene: 84489286
Centisome position: 31.55
GC content: 21.38
Gene sequence:
>276_bases ATGACAACAAAAGATAGTTCATCAAATAATCAGTCAAATAATAGTTCTAATAATAGTTCTAATAATAGTTCTAATAATAG TTCTAATAATAGTTCTAATAATAGTTCTAATAATAGTTCTAATAATAGTTCTAATAATAGTTCTAATAATAGTTCTAATA ATAGTTCTAATAATAGTTCTAATAATAGTTCTAATAATAGTTCTAATAATAACAATTCTGGTTGGACTAGCAATAATAGA AGAAACACAGTAACTAAATCAAACGGCGAAAAATAA
Upstream 100 bases:
>100_bases ATTTCAAAGCATTAGATGAAAGTATACAATTTGAAGTTGAAAGTGATTTTGAAGAATTTAAAATGGACACAATAAGTAAA TATTAATGGAGGTTCTATAT
Downstream 100 bases:
>100_bases TAAATAAAATATAAATATTATTAAGGATACTTATGATAGAATCAGATATTAAACGATATGAACTTTTATTGGATTTGCTA CAAAAAAGCAAAAAAGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MTTKDSSSNNQSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNNNSGWTSNNR RNTVTKSNGEK
Sequences:
>Translated_91_residues MTTKDSSSNNQSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNNNSGWTSNNR RNTVTKSNGEK >Mature_90_residues TTKDSSSNNQSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNNNSGWTSNNRR NTVTKSNGEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9507; Mature: 9376
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKDSSSNNQSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NNSSNNSSNNNNSGWTSNNRRNTVTKSNGEK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTKDSSSNNQSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSSNNSS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NNSSNNSSNNNNSGWTSNNRRNTVTKSNGEK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA