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The map label for this gene is 84489236

Identifier: 84489236

GI number: 84489236

Start: 488802

End: 489800

Strand: Direct

Name: 84489236

Synonym: Msp_0424

Alternate gene names: NA

Gene position: 488802-489800 (Clockwise)

Preceding gene: 84489235

Following gene: 84489237

Centisome position: 27.66

GC content: 26.43

Gene sequence:

>999_bases
TTGCTTAATATAGGTTGTGATACTATTAAAGAACCATTATATATTAACTCAAATGGGATATTATACCGAAAAGAGAATAC
ACTTAAATTTAAAAATAAAGAAGTTGACACAAGTATACCAATTCACGCAATCAATGAAATAAATTGTTATGGAAAAGTTT
CATTGCGATCAGGAGCAATATCATTACTACAAAAAGAAAAAATAATAATAAATTTCTTTAATAAATATGGATATTATGAA
GGATCATTATACCCAAAAATAGCACTAAATTCAGGAGTAATAGTAGTGAAACAAGCATTAACATACAATAATGAAAATAA
ACGATGTTTTATAGCTAAGGAAATGGTAAATGGAATGAAACATAACATGATAAAAACATTAAAATATTATAAGAAAAAAG
GAAAAGATGTTGATGAACACATTCAAAACCTTGAAAATGAATCAATTTTAGATGGAAATATCAATAGAATACTCTCATCC
GAAGGAAAATTATGGCAATCATACTACCCCTCATTTGATAACATCACAAAAAAATTTCCAATAGAAAAAAGAGAATTCAA
ACCACCAAAAAATGAAATGAACTCCTTAATATCCTATGGAAATTCATTATTATATACTACAACACTATCCGAAATCTATC
ATACCTACCTTCATCCATCAATAAGTTTCCTGCATGAACCTCGTGAAAGAAGATTTTCACTTGCATGTGATCTAGCAGAC
ATATTCAAACCATTAATAATAAGTAGAACTATATTCAAATTGGTAAATACTAATATAATTAATGAAAAACACTTTAAAAA
AGATGTGGGAGTATATCTCAATGAAAAAGGAAGACAAAAATTCATACAAGAATACAATAATAAACTTAAAACAACAATAA
AACATCCACAAATTAAGAAAAAAGTCTCATATAGATACTTAATAAGATTAGAAGGATATAAATTAATCAAACATATACTT
GAAGATAAAACATACGAAAGCTTCAAGACGTGGTGGTAG

Upstream 100 bases:

>100_bases
TTGATGATATAATTAAAGAAATTAAGAAAATATCAAATGAAACAAAACCACCTCATGAAAAACAAAAACCCTACTGTCAA
GGATGTTCTTTCAGAGAACT

Downstream 100 bases:

>100_bases
GAATATACATATTAGTAATATATGATATTAAAATAGAACGAATAAATAAAGTATACAAATTTCTTAAAACATATTTAATA
TGGATTCAAAATTCAGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLNIGCDTIKEPLYINSNGILYRKENTLKFKNKEVDTSIPIHAINEINCYGKVSLRSGAISLLQKEKIIINFFNKYGYYE
GSLYPKIALNSGVIVVKQALTYNNENKRCFIAKEMVNGMKHNMIKTLKYYKKKGKDVDEHIQNLENESILDGNINRILSS
EGKLWQSYYPSFDNITKKFPIEKREFKPPKNEMNSLISYGNSLLYTTTLSEIYHTYLHPSISFLHEPRERRFSLACDLAD
IFKPLIISRTIFKLVNTNIINEKHFKKDVGVYLNEKGRQKFIQEYNNKLKTTIKHPQIKKKVSYRYLIRLEGYKLIKHIL
EDKTYESFKTWW

Sequences:

>Translated_332_residues
MLNIGCDTIKEPLYINSNGILYRKENTLKFKNKEVDTSIPIHAINEINCYGKVSLRSGAISLLQKEKIIINFFNKYGYYE
GSLYPKIALNSGVIVVKQALTYNNENKRCFIAKEMVNGMKHNMIKTLKYYKKKGKDVDEHIQNLENESILDGNINRILSS
EGKLWQSYYPSFDNITKKFPIEKREFKPPKNEMNSLISYGNSLLYTTTLSEIYHTYLHPSISFLHEPRERRFSLACDLAD
IFKPLIISRTIFKLVNTNIINEKHFKKDVGVYLNEKGRQKFIQEYNNKLKTTIKHPQIKKKVSYRYLIRLEGYKLIKHIL
EDKTYESFKTWW
>Mature_332_residues
MLNIGCDTIKEPLYINSNGILYRKENTLKFKNKEVDTSIPIHAINEINCYGKVSLRSGAISLLQKEKIIINFFNKYGYYE
GSLYPKIALNSGVIVVKQALTYNNENKRCFIAKEMVNGMKHNMIKTLKYYKKKGKDVDEHIQNLENESILDGNINRILSS
EGKLWQSYYPSFDNITKKFPIEKREFKPPKNEMNSLISYGNSLLYTTTLSEIYHTYLHPSISFLHEPRERRFSLACDLAD
IFKPLIISRTIFKLVNTNIINEKHFKKDVGVYLNEKGRQKFIQEYNNKLKTTIKHPQIKKKVSYRYLIRLEGYKLIKHIL
EDKTYESFKTWW

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019858 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 39112; Mature: 39112

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIGCDTIKEPLYINSNGILYRKENTLKFKNKEVDTSIPIHAINEINCYGKVSLRSGAI
CCCCCCHHHCCCEEECCCEEEEEECCCEEECCCCCCCCCCEEEECCCCCEEEEEECHHHH
SLLQKEKIIINFFNKYGYYEGSLYPKIALNSGVIVVKQALTYNNENKRCFIAKEMVNGMK
HHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEHHHCCCCCCEEEEEHHHHHHHH
HNMIKTLKYYKKKGKDVDEHIQNLENESILDGNINRILSSEGKLWQSYYPSFDNITKKFP
HHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHCCCHHHHHHCCC
IEKREFKPPKNEMNSLISYGNSLLYTTTLSEIYHTYLHPSISFLHEPRERRFSLACDLAD
CCHHCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCHHHHHHCHHHHHHHHCCCHHH
IFKPLIISRTIFKLVNTNIINEKHFKKDVGVYLNEKGRQKFIQEYNNKLKTTIKHPQIKK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCHHHHHHHHHHHHHHHHHHCCCHHHH
KVSYRYLIRLEGYKLIKHILEDKTYESFKTWW
HCCEEEEEEECHHHHHHHHHCCCCHHHHHCCC
>Mature Secondary Structure
MLNIGCDTIKEPLYINSNGILYRKENTLKFKNKEVDTSIPIHAINEINCYGKVSLRSGAI
CCCCCCHHHCCCEEECCCEEEEEECCCEEECCCCCCCCCCEEEECCCCCEEEEEECHHHH
SLLQKEKIIINFFNKYGYYEGSLYPKIALNSGVIVVKQALTYNNENKRCFIAKEMVNGMK
HHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEHHHCCCCCCEEEEEHHHHHHHH
HNMIKTLKYYKKKGKDVDEHIQNLENESILDGNINRILSSEGKLWQSYYPSFDNITKKFP
HHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHCCCHHHHHHCCC
IEKREFKPPKNEMNSLISYGNSLLYTTTLSEIYHTYLHPSISFLHEPRERRFSLACDLAD
CCHHCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCHHHHHHCHHHHHHHHCCCHHH
IFKPLIISRTIFKLVNTNIINEKHFKKDVGVYLNEKGRQKFIQEYNNKLKTTIKHPQIKK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCHHHHHHHHHHHHHHHHHHCCCHHHH
KVSYRYLIRLEGYKLIKHILEDKTYESFKTWW
HCCEEEEEEECHHHHHHHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]