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The map label for this gene is 84489235

Identifier: 84489235

GI number: 84489235

Start: 488317

End: 488814

Strand: Direct

Name: 84489235

Synonym: Msp_0423

Alternate gene names: NA

Gene position: 488317-488814 (Clockwise)

Preceding gene: 84489234

Following gene: 84489236

Centisome position: 27.63

GC content: 24.5

Gene sequence:

>498_bases
ATGAAAGATTCACAGATAACTGGAGTAATGATTCAGTATTATAAAATATGTAAAAGAGAACTATGGTTTTATATGAATCA
AATAAATATGAACTATGATAATAATGATATTGAAATTGGAAGATTAATACATGAAAATAGTTACAAAAGAGAAAAAAAGG
AAATTCGTGTAGATAACTTAGTATTTGATTTTATACAAACAAAAGATAAGCTAACAGTATTTGAAGTAAAAAAATCAAGT
AAAATTACAATCGGGGCATTATATCAATTATACTACTATTTATACACATTAAAAAACGCAGATATAGAAGCAAAAGGAAT
GTTAGTATTTCCAAAAGAAAAGAAAAGAGAATCCATAGAACTAACAGAAGATATAATTAAAGAAATTGATGATATAATTA
AAGAAATTAAGAAAATATCAAATGAAACAAAACCACCTCATGAAAAACAAAAACCCTACTGTCAAGGATGTTCTTTCAGA
GAACTTTGCTTAATATAG

Upstream 100 bases:

>100_bases
TCATGTAGGAAAAAATGATATTGAACGAAAATATAATCTAAATACGGGTTTTATAGCACAAGAAAACGAAAATGCATATA
TGATATAAAGGATAAATATG

Downstream 100 bases:

>100_bases
GTTGTGATACTATTAAAGAACCATTATATATTAACTCAAATGGGATATTATACCGAAAAGAGAATACACTTAAATTTAAA
AATAAAGAAGTTGACACAAG

Product: exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKDSQITGVMIQYYKICKRELWFYMNQINMNYDNNDIEIGRLIHENSYKREKKEIRVDNLVFDFIQTKDKLTVFEVKKSS
KITIGALYQLYYYLYTLKNADIEAKGMLVFPKEKKRESIELTEDIIKEIDDIIKEIKKISNETKPPHEKQKPYCQGCSFR
ELCLI

Sequences:

>Translated_165_residues
MKDSQITGVMIQYYKICKRELWFYMNQINMNYDNNDIEIGRLIHENSYKREKKEIRVDNLVFDFIQTKDKLTVFEVKKSS
KITIGALYQLYYYLYTLKNADIEAKGMLVFPKEKKRESIELTEDIIKEIDDIIKEIKKISNETKPPHEKQKPYCQGCSFR
ELCLI
>Mature_165_residues
MKDSQITGVMIQYYKICKRELWFYMNQINMNYDNNDIEIGRLIHENSYKREKKEIRVDNLVFDFIQTKDKLTVFEVKKSS
KITIGALYQLYYYLYTLKNADIEAKGMLVFPKEKKRESIELTEDIIKEIDDIIKEIKKISNETKPPHEKQKPYCQGCSFR
ELCLI

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013343
- InterPro:   IPR022765 [H]

Pfam domain/function: PF01930 DUF83 [H]

EC number: NA

Molecular weight: Translated: 19784; Mature: 19784

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDSQITGVMIQYYKICKRELWFYMNQINMNYDNNDIEIGRLIHENSYKREKKEIRVDNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
VFDFIQTKDKLTVFEVKKSSKITIGALYQLYYYLYTLKNADIEAKGMLVFPKEKKRESIE
HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHCHHHHH
LTEDIIKEIDDIIKEIKKISNETKPPHEKQKPYCQGCSFRELCLI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCHHHCCC
>Mature Secondary Structure
MKDSQITGVMIQYYKICKRELWFYMNQINMNYDNNDIEIGRLIHENSYKREKKEIRVDNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
VFDFIQTKDKLTVFEVKKSSKITIGALYQLYYYLYTLKNADIEAKGMLVFPKEKKRESIE
HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHCHHHHH
LTEDIIKEIDDIIKEIKKISNETKPPHEKQKPYCQGCSFRELCLI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]