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The map label for this gene is 84489237

Identifier: 84489237

GI number: 84489237

Start: 489794

End: 490063

Strand: Direct

Name: 84489237

Synonym: Msp_0425

Alternate gene names: NA

Gene position: 489794-490063 (Clockwise)

Preceding gene: 84489236

Following gene: 84489239

Centisome position: 27.71

GC content: 21.11

Gene sequence:

>270_bases
GTGGTAGGAATATACATATTAGTAATATATGATATTAAAATAGAACGAATAAATAAAGTATACAAATTTCTTAAAACATA
TTTAATATGGATTCAAAATTCAGTATTTGAAGGAGAAATAACAAAAGCACAATATAAAACAATGATTATAAAACTAAAAG
AATTAACAGACGAAGATGAAGATTCAATAATTATATATAAGATACCTAAGAAATATTTAAATAAGGAAGTACTTGGAATA
GAAAAAAATCCAATAGAATTTATACTCTAG

Upstream 100 bases:

>100_bases
TTAAGAAAAAAGTCTCATATAGATACTTAATAAGATTAGAAGGATATAAATTAATCAAACATATACTTGAAGATAAAACA
TACGAAAGCTTCAAGACGTG

Downstream 100 bases:

>100_bases
GTCCACTCCCCTATAATTTTTACAACATTAGGGGTGGACTATAAACAACTACTTTTTTAAACAATCACAACAGTTTAAAG
AGTAAAATACGAAAAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MVGIYILVIYDIKIERINKVYKFLKTYLIWIQNSVFEGEITKAQYKTMIIKLKELTDEDEDSIIIYKIPKKYLNKEVLGI
EKNPIEFIL

Sequences:

>Translated_89_residues
MVGIYILVIYDIKIERINKVYKFLKTYLIWIQNSVFEGEITKAQYKTMIIKLKELTDEDEDSIIIYKIPKKYLNKEVLGI
EKNPIEFIL
>Mature_89_residues
MVGIYILVIYDIKIERINKVYKFLKTYLIWIQNSVFEGEITKAQYKTMIIKLKELTDEDEDSIIIYKIPKKYLNKEVLGI
EKNPIEFIL

Specific function: Unknown

COG id: COG1343

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021127
- InterPro:   IPR000640
- InterPro:   IPR019199 [H]

Pfam domain/function: PF09827 CRISPR_Cas2 [H]

EC number: NA

Molecular weight: Translated: 10661; Mature: 10661

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGIYILVIYDIKIERINKVYKFLKTYLIWIQNSVFEGEITKAQYKTMIIKLKELTDEDE
CCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEECCCCCCC
DSIIIYKIPKKYLNKEVLGIEKNPIEFIL
CCEEEEECCHHHCCCEEECCCCCCCEEEC
>Mature Secondary Structure
MVGIYILVIYDIKIERINKVYKFLKTYLIWIQNSVFEGEITKAQYKTMIIKLKELTDEDE
CCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEECCCCCCC
DSIIIYKIPKKYLNKEVLGIEKNPIEFIL
CCEEEEECCHHHCCCEEECCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]