Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489224
Identifier: 84489224
GI number: 84489224
Start: 473915
End: 474535
Strand: Direct
Name: 84489224
Synonym: Msp_0412
Alternate gene names: NA
Gene position: 473915-474535 (Clockwise)
Preceding gene: 84489223
Following gene: 84489225
Centisome position: 26.81
GC content: 29.31
Gene sequence:
>621_bases ATGGGCTTATTTAATAGTATTGAAATTGATCCAAATGTAATTCCCTACATACAAAAGGGAGAAGGTGTAGGAATAGTTAA AATAGATGGAATGGGTAAATGTTCTGCAAAACTAGAAAACAATGCAATAATACTCGATCCATATGAATCACCACAACAAT CTCAAATAATATCTCTTGAGGAAATTAATTTTCTAAGTTATGATGAAGGAAACTTCATTAATGAACCAAAAATTAATATT GGAACATCTGGAAAACATTATGTGCTAGCTGGTGTGGATGATAATGATGATGAATTAAAACGTTTCTATAATACAATTTT AAATATTAAAGAAAATAGTAGAATTCCAAAATATCAAAATGGTATGCCACAACCAAATACTCATGTGACAAATCCAAATA AACAACCACAACTCCAACATAATAATATGGATTTTAATCCTTCAGTAAACAACTCCACAGAACAATCCCAACCTCACCTA CTTAATAATGATGATGTTATAGATGGACAAGATAAGATGGATCCTGTAGCTGAAATTAGAAGATACTTTGAATTAAAAGA AGATGGAATTATTACAGAAGAAGAATTTACTAAGAAGAAAAAACAATTACTTGGACTTTAA
Upstream 100 bases:
>100_bases ATTATTATTTCTTTAGAAAGATTTTTCTTAAGATAACTTTTAATTATTTATAGAAATATAACTATTATTACATAACAATA AAAATAATATAGTGATAAAA
Downstream 100 bases:
>100_bases ACTTAATATCCTCACCATTTCTTTTTTTTTGGACAATAGTTTTCAAAGTTTCTTTTAATAAATATCTATTATGAGGGGTA TTATGAATAAAACAAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MGLFNSIEIDPNVIPYIQKGEGVGIVKIDGMGKCSAKLENNAIILDPYESPQQSQIISLEEINFLSYDEGNFINEPKINI GTSGKHYVLAGVDDNDDELKRFYNTILNIKENSRIPKYQNGMPQPNTHVTNPNKQPQLQHNNMDFNPSVNNSTEQSQPHL LNNDDVIDGQDKMDPVAEIRRYFELKEDGIITEEEFTKKKKQLLGL
Sequences:
>Translated_206_residues MGLFNSIEIDPNVIPYIQKGEGVGIVKIDGMGKCSAKLENNAIILDPYESPQQSQIISLEEINFLSYDEGNFINEPKINI GTSGKHYVLAGVDDNDDELKRFYNTILNIKENSRIPKYQNGMPQPNTHVTNPNKQPQLQHNNMDFNPSVNNSTEQSQPHL LNNDDVIDGQDKMDPVAEIRRYFELKEDGIITEEEFTKKKKQLLGL >Mature_205_residues GLFNSIEIDPNVIPYIQKGEGVGIVKIDGMGKCSAKLENNAIILDPYESPQQSQIISLEEINFLSYDEGNFINEPKINIG TSGKHYVLAGVDDNDDELKRFYNTILNIKENSRIPKYQNGMPQPNTHVTNPNKQPQLQHNNMDFNPSVNNSTEQSQPHLL NNDDVIDGQDKMDPVAEIRRYFELKEDGIITEEEFTKKKKQLLGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23362; Mature: 23231
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFNSIEIDPNVIPYIQKGEGVGIVKIDGMGKCSAKLENNAIILDPYESPQQSQIISLE CCCCCCEEECCCCCCEEECCCCEEEEEECCCCCCCEEECCCEEEECCCCCCCCCEEEEHH EINFLSYDEGNFINEPKINIGTSGKHYVLAGVDDNDDELKRFYNTILNIKENSRIPKYQN HCCEEEECCCCCCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHC GMPQPNTHVTNPNKQPQLQHNNMDFNPSVNNSTEQSQPHLLNNDDVIDGQDKMDPVAEIR CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHH RYFELKEDGIITEEEFTKKKKQLLGL HHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure GLFNSIEIDPNVIPYIQKGEGVGIVKIDGMGKCSAKLENNAIILDPYESPQQSQIISLE CCCCCEEECCCCCCEEECCCCEEEEEECCCCCCCEEECCCEEEECCCCCCCCCEEEEHH EINFLSYDEGNFINEPKINIGTSGKHYVLAGVDDNDDELKRFYNTILNIKENSRIPKYQN HCCEEEECCCCCCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHC GMPQPNTHVTNPNKQPQLQHNNMDFNPSVNNSTEQSQPHLLNNDDVIDGQDKMDPVAEIR CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHH RYFELKEDGIITEEEFTKKKKQLLGL HHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA