Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489224

Identifier: 84489224

GI number: 84489224

Start: 473915

End: 474535

Strand: Direct

Name: 84489224

Synonym: Msp_0412

Alternate gene names: NA

Gene position: 473915-474535 (Clockwise)

Preceding gene: 84489223

Following gene: 84489225

Centisome position: 26.81

GC content: 29.31

Gene sequence:

>621_bases
ATGGGCTTATTTAATAGTATTGAAATTGATCCAAATGTAATTCCCTACATACAAAAGGGAGAAGGTGTAGGAATAGTTAA
AATAGATGGAATGGGTAAATGTTCTGCAAAACTAGAAAACAATGCAATAATACTCGATCCATATGAATCACCACAACAAT
CTCAAATAATATCTCTTGAGGAAATTAATTTTCTAAGTTATGATGAAGGAAACTTCATTAATGAACCAAAAATTAATATT
GGAACATCTGGAAAACATTATGTGCTAGCTGGTGTGGATGATAATGATGATGAATTAAAACGTTTCTATAATACAATTTT
AAATATTAAAGAAAATAGTAGAATTCCAAAATATCAAAATGGTATGCCACAACCAAATACTCATGTGACAAATCCAAATA
AACAACCACAACTCCAACATAATAATATGGATTTTAATCCTTCAGTAAACAACTCCACAGAACAATCCCAACCTCACCTA
CTTAATAATGATGATGTTATAGATGGACAAGATAAGATGGATCCTGTAGCTGAAATTAGAAGATACTTTGAATTAAAAGA
AGATGGAATTATTACAGAAGAAGAATTTACTAAGAAGAAAAAACAATTACTTGGACTTTAA

Upstream 100 bases:

>100_bases
ATTATTATTTCTTTAGAAAGATTTTTCTTAAGATAACTTTTAATTATTTATAGAAATATAACTATTATTACATAACAATA
AAAATAATATAGTGATAAAA

Downstream 100 bases:

>100_bases
ACTTAATATCCTCACCATTTCTTTTTTTTTGGACAATAGTTTTCAAAGTTTCTTTTAATAAATATCTATTATGAGGGGTA
TTATGAATAAAACAAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MGLFNSIEIDPNVIPYIQKGEGVGIVKIDGMGKCSAKLENNAIILDPYESPQQSQIISLEEINFLSYDEGNFINEPKINI
GTSGKHYVLAGVDDNDDELKRFYNTILNIKENSRIPKYQNGMPQPNTHVTNPNKQPQLQHNNMDFNPSVNNSTEQSQPHL
LNNDDVIDGQDKMDPVAEIRRYFELKEDGIITEEEFTKKKKQLLGL

Sequences:

>Translated_206_residues
MGLFNSIEIDPNVIPYIQKGEGVGIVKIDGMGKCSAKLENNAIILDPYESPQQSQIISLEEINFLSYDEGNFINEPKINI
GTSGKHYVLAGVDDNDDELKRFYNTILNIKENSRIPKYQNGMPQPNTHVTNPNKQPQLQHNNMDFNPSVNNSTEQSQPHL
LNNDDVIDGQDKMDPVAEIRRYFELKEDGIITEEEFTKKKKQLLGL
>Mature_205_residues
GLFNSIEIDPNVIPYIQKGEGVGIVKIDGMGKCSAKLENNAIILDPYESPQQSQIISLEEINFLSYDEGNFINEPKINIG
TSGKHYVLAGVDDNDDELKRFYNTILNIKENSRIPKYQNGMPQPNTHVTNPNKQPQLQHNNMDFNPSVNNSTEQSQPHLL
NNDDVIDGQDKMDPVAEIRRYFELKEDGIITEEEFTKKKKQLLGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23362; Mature: 23231

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFNSIEIDPNVIPYIQKGEGVGIVKIDGMGKCSAKLENNAIILDPYESPQQSQIISLE
CCCCCCEEECCCCCCEEECCCCEEEEEECCCCCCCEEECCCEEEECCCCCCCCCEEEEHH
EINFLSYDEGNFINEPKINIGTSGKHYVLAGVDDNDDELKRFYNTILNIKENSRIPKYQN
HCCEEEECCCCCCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHC
GMPQPNTHVTNPNKQPQLQHNNMDFNPSVNNSTEQSQPHLLNNDDVIDGQDKMDPVAEIR
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHH
RYFELKEDGIITEEEFTKKKKQLLGL
HHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
GLFNSIEIDPNVIPYIQKGEGVGIVKIDGMGKCSAKLENNAIILDPYESPQQSQIISLE
CCCCCEEECCCCCCEEECCCCEEEEEECCCCCCCEEECCCEEEECCCCCCCCCEEEEHH
EINFLSYDEGNFINEPKINIGTSGKHYVLAGVDDNDDELKRFYNTILNIKENSRIPKYQN
HCCEEEECCCCCCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHC
GMPQPNTHVTNPNKQPQLQHNNMDFNPSVNNSTEQSQPHLLNNDDVIDGQDKMDPVAEIR
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHH
RYFELKEDGIITEEEFTKKKKQLLGL
HHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA