Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is hisA
Identifier: 84489201
GI number: 84489201
Start: 452662
End: 453375
Strand: Direct
Name: hisA
Synonym: Msp_0389
Alternate gene names: 84489201
Gene position: 452662-453375 (Clockwise)
Preceding gene: 84489197
Following gene: 84489202
Centisome position: 25.61
GC content: 29.41
Gene sequence:
>714_bases ATGATTATAATACCAGCAGTAGATATTAAAAATGGGAAATGTGTACAGTTAGTACAAGGAGAACCTGGAACAGAACAAGT AGTAATTGAAAATCCTGCAGAAGTAGCAAAACAATGGGAACAAAAGGGAGCAAAAAAATTACATATTGTTGATTTAGATG GTGCACTAGGTAGTGGAAGAAATCTTTCAATAGTCAAAGAAATAATAGAAAAAACAAAGTCTCCTATTCAATTGGGTGGA GGAATAAGATCCGTTAGTGATGCAAAGAAATTACTTGAAATTGGAGTTAACACTGTAATAATAGGTACAATGGCAATTAA AAATCCAGAAATAATCAAGGAATTATCTAGTGAATATGGTTGTGAAAGAATCTGTGTTTCTTTAGATAGTAAAAACAACA AAGTAGTAACACATGGCTGGAAAGAATCTACAGATAAAACACCAATTGAATATGCTAAATTATTTGAAAAAATGGGTGCA GGTTCAATACTATTTACAAATGTGGATGTTGAAGGGTTATTAAATGGAATAAATCTTGAACCTATAAAAGAATTATTAAA TAATGTCTCTATTCCAATAATATATTCTGGTGGTATAACTTCTGTTGATGATTTAAAAGTTTTATCAGATATTGGAGTAG ATTATGTTGTAATTGGTTCTGCATTATACAAAGGATTAATAACATTAGAAGATGCTTTAAAATATCAAAAATAG
Upstream 100 bases:
>100_bases TAAGTTTTTTATCAACATATTAAACGTTAATAACATAATATATTAAACATATAAATTTAAAATAATTAGAACTTTTTTAT AAAAAAATGAGTTGAATATA
Downstream 100 bases:
>100_bases ATTAGGGGGTATTTAAATTAAAGTTATGGCTTCAGGAACATTTGATATAATACATCCAGGTCATGGTTTTTACTTATCAG AATCAAAAAAACTTGGTGGA
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MIIIPAVDIKNGKCVQLVQGEPGTEQVVIENPAEVAKQWEQKGAKKLHIVDLDGALGSGRNLSIVKEIIEKTKSPIQLGG GIRSVSDAKKLLEIGVNTVIIGTMAIKNPEIIKELSSEYGCERICVSLDSKNNKVVTHGWKESTDKTPIEYAKLFEKMGA GSILFTNVDVEGLLNGINLEPIKELLNNVSIPIIYSGGITSVDDLKVLSDIGVDYVVIGSALYKGLITLEDALKYQK
Sequences:
>Translated_237_residues MIIIPAVDIKNGKCVQLVQGEPGTEQVVIENPAEVAKQWEQKGAKKLHIVDLDGALGSGRNLSIVKEIIEKTKSPIQLGG GIRSVSDAKKLLEIGVNTVIIGTMAIKNPEIIKELSSEYGCERICVSLDSKNNKVVTHGWKESTDKTPIEYAKLFEKMGA GSILFTNVDVEGLLNGINLEPIKELLNNVSIPIIYSGGITSVDDLKVLSDIGVDYVVIGSALYKGLITLEDALKYQK >Mature_237_residues MIIIPAVDIKNGKCVQLVQGEPGTEQVVIENPAEVAKQWEQKGAKKLHIVDLDGALGSGRNLSIVKEIIEKTKSPIQLGG GIRSVSDAKKLLEIGVNTVIIGTMAIKNPEIIKELSSEYGCERICVSLDSKNNKVVTHGWKESTDKTPIEYAKLFEKMGA GSILFTNVDVEGLLNGINLEPIKELLNNVSIPIIYSGGITSVDDLKVLSDIGVDYVVIGSALYKGLITLEDALKYQK
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=239, Percent_Identity=30.5439330543933, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1788336, Length=246, Percent_Identity=26.8292682926829, Blast_Score=94, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_METST (Q2NHB3)
Other databases:
- EMBL: CP000102 - RefSeq: YP_447433.1 - HSSP: P16250 - ProteinModelPortal: Q2NHB3 - SMR: Q2NHB3 - STRING: Q2NHB3 - GeneID: 3855754 - GenomeReviews: CP000102_GR - KEGG: mst:Msp_0389 - NMPDR: fig|339860.6.peg.371 - eggNOG: arNOG08089 - HOGENOM: HBG541613 - OMA: CARYVVT - PhylomeDB: Q2NHB3 - ProtClustDB: PRK13585 - BioCyc: MSTA339860:MSP_0389-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 25627; Mature: 25627
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: ACT_SITE 8-8 ACT_SITE 129-129
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIIPAVDIKNGKCVQLVQGEPGTEQVVIENPAEVAKQWEQKGAKKLHIVDLDGALGSGR CEEEEEEECCCCCEEEEEECCCCCCEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCCC NLSIVKEIIEKTKSPIQLGGGIRSVSDAKKLLEIGVNTVIIGTMAIKNPEIIKELSSEYG CHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCC CERICVSLDSKNNKVVTHGWKESTDKTPIEYAKLFEKMGAGSILFTNVDVEGLLNGINLE CEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCHH PIKELLNNVSIPIIYSGGITSVDDLKVLSDIGVDYVVIGSALYKGLITLEDALKYQK HHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIIIPAVDIKNGKCVQLVQGEPGTEQVVIENPAEVAKQWEQKGAKKLHIVDLDGALGSGR CEEEEEEECCCCCEEEEEECCCCCCEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCCC NLSIVKEIIEKTKSPIQLGGGIRSVSDAKKLLEIGVNTVIIGTMAIKNPEIIKELSSEYG CHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCC CERICVSLDSKNNKVVTHGWKESTDKTPIEYAKLFEKMGAGSILFTNVDVEGLLNGINLE CEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCHH PIKELLNNVSIPIIYSGGITSVDDLKVLSDIGVDYVVIGSALYKGLITLEDALKYQK HHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA