Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489197
Identifier: 84489197
GI number: 84489197
Start: 448992
End: 449555
Strand: Direct
Name: 84489197
Synonym: Msp_0385
Alternate gene names: NA
Gene position: 448992-449555 (Clockwise)
Preceding gene: 84489194
Following gene: 84489201
Centisome position: 25.4
GC content: 31.21
Gene sequence:
>564_bases ATGGATATTTTAACTTTAATTTTTTATTCAATATATTTAATGATTCCAGCATATCTTGCTAATGGTTCTGCATTAGTGTT TGGTGGTGGAACTCCTATGGATTTTGGTCATTATTGCTGGGATAATCGTAGATTAATTGGTAATGGTGTCACATGGAGAG GTACTGTTTGTGGTGGCTTGTTTGGAATGGTTATTGGAGGTATTTTAGGACTTCTAGCAACTTATGGTATTGGAAGTTAT TTTTTTAATATAACTGCCTCACAAATAACATTCATGTCTGGGTTTGTACCTCAAGGATTATTGGTTGGCTTTTTATTAGG TTTTGGTGCACTTATTGGTGATGCTATTGGTAGCTTTTTAAAAAGAAGATTGAATTTTGAACGTGGAAAACCAGTACCAT TACTAGATCAGTTAGACTTTGTTGTTGTTTCATTATTATTTGTTTCAACAGTTGTTAGTCTAAGTTTGGAAATGATTGTA ATAATCATACTTGTAAGTATCTTTTTACATCTTGGTGCAAATATGTTTGCATATATGATTAATTTAAAAGATGTATGGTA TTAA
Upstream 100 bases:
>100_bases AGGTATAATTATATATTGCTTATATTTATGGAAATTACATATATTATAATAATAGTAAAATTATAAGTATAAATATAATT ACAAAATTCTGAGGTTTATT
Downstream 100 bases:
>100_bases GAAATAAAAATAATGAGAAAAGGATTGATTAGATTCAATCAAATCATTTTTTTTTAAATGTATTGTATTAATGGAAAATC TTGTGAAATATATTCTTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MDILTLIFYSIYLMIPAYLANGSALVFGGGTPMDFGHYCWDNRRLIGNGVTWRGTVCGGLFGMVIGGILGLLATYGIGSY FFNITASQITFMSGFVPQGLLVGFLLGFGALIGDAIGSFLKRRLNFERGKPVPLLDQLDFVVVSLLFVSTVVSLSLEMIV IIILVSIFLHLGANMFAYMINLKDVWY
Sequences:
>Translated_187_residues MDILTLIFYSIYLMIPAYLANGSALVFGGGTPMDFGHYCWDNRRLIGNGVTWRGTVCGGLFGMVIGGILGLLATYGIGSY FFNITASQITFMSGFVPQGLLVGFLLGFGALIGDAIGSFLKRRLNFERGKPVPLLDQLDFVVVSLLFVSTVVSLSLEMIV IIILVSIFLHLGANMFAYMINLKDVWY >Mature_187_residues MDILTLIFYSIYLMIPAYLANGSALVFGGGTPMDFGHYCWDNRRLIGNGVTWRGTVCGGLFGMVIGGILGLLATYGIGSY FFNITASQITFMSGFVPQGLLVGFLLGFGALIGDAIGSFLKRRLNFERGKPVPLLDQLDFVVVSLLFVSTVVSLSLEMIV IIILVSIFLHLGANMFAYMINLKDVWY
Specific function: Unknown
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0290 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y385_METST (Q2NHB7)
Other databases:
- EMBL: CP000102 - RefSeq: YP_447429.1 - STRING: Q2NHB7 - GeneID: 3855750 - GenomeReviews: CP000102_GR - KEGG: mst:Msp_0385 - NMPDR: fig|339860.6.peg.367 - eggNOG: arNOG10050 - HOGENOM: HBG297562 - OMA: GKTWRGT - ProtClustDB: PRK04032 - BioCyc: MSTA339860:MSP_0385-MONOMER - HAMAP: MF_01117 - InterPro: IPR002726
Pfam domain/function: PF01864 DUF46
EC number: NA
Molecular weight: Translated: 20446; Mature: 20446
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x14f98248)-; HASH(0x145b504c)-; HASH(0x1538a4b8)-; HASH(0x1542ca08)-; HASH(0x14513978)-;
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILTLIFYSIYLMIPAYLANGSALVFGGGTPMDFGHYCWDNRRLIGNGVTWRGTVCGGL CHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHCCCCEEECCCCEECHHHHHHH FGMVIGGILGLLATYGIGSYFFNITASQITFMSGFVPQGLLVGFLLGFGALIGDAIGSFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH KRRLNFERGKPVPLLDQLDFVVVSLLFVSTVVSLSLEMIVIIILVSIFLHLGANMFAYMI HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH NLKDVWY HHHHHCH >Mature Secondary Structure MDILTLIFYSIYLMIPAYLANGSALVFGGGTPMDFGHYCWDNRRLIGNGVTWRGTVCGGL CHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHCCCCEEECCCCEECHHHHHHH FGMVIGGILGLLATYGIGSYFFNITASQITFMSGFVPQGLLVGFLLGFGALIGDAIGSFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH KRRLNFERGKPVPLLDQLDFVVVSLLFVSTVVSLSLEMIVIIILVSIFLHLGANMFAYMI HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH NLKDVWY HHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA