Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489177

Identifier: 84489177

GI number: 84489177

Start: 426541

End: 426975

Strand: Direct

Name: 84489177

Synonym: Msp_0363

Alternate gene names: NA

Gene position: 426541-426975 (Clockwise)

Preceding gene: 84489171

Following gene: 84489180

Centisome position: 24.13

GC content: 24.14

Gene sequence:

>435_bases
ATGAAAAAATCAAGGTTAAGACTTTTTAAAACAACTTCTTTAACAATTTCTTTAATTGGTATAATTTTAATTTTATTAAC
TATTGGTGTAGTTGGATATATCATAGTGACAGATGTAACAAATTCTGTTTCCACAACTGTAAATAGTGGTTCTGCATATG
ATAATTTAACTCAGTTAAAATCAGATTATAATAATTTATCACAGAAATATTCGGCTTTAAATGAACAGTTAGGAACTCAT
GCTGAAAATAATGTTAAAACTAATTATAATGAAGGTAAATTGAAATTATCTGAATTAAATGAAACTATTAATTCAATAGA
AAGTGATATTAATAAAGGTGCTTCTGATAAAATAATCAGTAGTGAAATTAATCAAGCAAAAGAAGATATAAAAGAAGCTG
AAGAAGTGTATAATAATATAACTGCATCTAAGTAG

Upstream 100 bases:

>100_bases
TTTTTTTTACATAATAATTATTAATACTTTTAATAATAAAAAAATATACTAGAGATAAAATAACTAAGAATAATATATTA
TTAGATTAGAGAGGTTTTTT

Downstream 100 bases:

>100_bases
TTGTGCTTCTTCAAATTATTTTTTTTATTAACTATTTTTTACTACCTCTAAATCCACGTGCAATAACATACATTTCAGCA
CTACGTTTACGTGAAGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKKSRLRLFKTTSLTISLIGIILILLTIGVVGYIIVTDVTNSVSTTVNSGSAYDNLTQLKSDYNNLSQKYSALNEQLGTH
AENNVKTNYNEGKLKLSELNETINSIESDINKGASDKIISSEINQAKEDIKEAEEVYNNITASK

Sequences:

>Translated_144_residues
MKKSRLRLFKTTSLTISLIGIILILLTIGVVGYIIVTDVTNSVSTTVNSGSAYDNLTQLKSDYNNLSQKYSALNEQLGTH
AENNVKTNYNEGKLKLSELNETINSIESDINKGASDKIISSEINQAKEDIKEAEEVYNNITASK
>Mature_144_residues
MKKSRLRLFKTTSLTISLIGIILILLTIGVVGYIIVTDVTNSVSTTVNSGSAYDNLTQLKSDYNNLSQKYSALNEQLGTH
AENNVKTNYNEGKLKLSELNETINSIESDINKGASDKIISSEINQAKEDIKEAEEVYNNITASK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15833; Mature: 15833

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSRLRLFKTTSLTISLIGIILILLTIGVVGYIIVTDVTNSVSTTVNSGSAYDNLTQLK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHH
SDYNNLSQKYSALNEQLGTHAENNVKTNYNEGKLKLSELNETINSIESDINKGASDKIIS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
SEINQAKEDIKEAEEVYNNITASK
HHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKSRLRLFKTTSLTISLIGIILILLTIGVVGYIIVTDVTNSVSTTVNSGSAYDNLTQLK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHH
SDYNNLSQKYSALNEQLGTHAENNVKTNYNEGKLKLSELNETINSIESDINKGASDKIIS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
SEINQAKEDIKEAEEVYNNITASK
HHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA