Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489089
Identifier: 84489089
GI number: 84489089
Start: 326448
End: 327914
Strand: Direct
Name: 84489089
Synonym: Msp_0262
Alternate gene names: NA
Gene position: 326448-327914 (Clockwise)
Preceding gene: 84489088
Following gene: 84489090
Centisome position: 18.47
GC content: 27.06
Gene sequence:
>1467_bases ATGAAATATAAAATATTAGCAATCATAGTAATTGTAGTACTACTTGGTATATTTTCTACTAAATTCCTCTACACAGATTC TATGGATATTGATAATAATACACTGGTAATATCAGTATGTACTGGGAATATGAGGGGATTGGAAACAGGAATTTCTGTAT ATGCTGGATATAATAAAGCACCACTAGTACTATCTGATAGAACATTACCTCAACAATTAGATTCATGGTTACCATCATTT ATTAAAAAAAACAATATTAAGAAAATAGTGGTTGTTGGACCTATCACTGCTAAACAACTACTACAACTACATATGTGTGG TGTTGAAGTTAAACAAGTCTATGGTAAATCTATACCAGACATATTAACAAAAGTTGCAGATAACACTCCAACTAAAAATA ATGATACACTTATATTTTCAGCATCAGATCCACTTGCAGGAGTTCTTGGAGCATATATAAAAACACCAGTTTTTATCACA GCAACAAATGAAACATATAATTCTGCAGATGTATTAGATACAAAATATGATGAATATATTAAAACACATAATATCTCACA CATAATAATCGTGGGAAATCTACCAGAATCTCTTAAAAATCAGTTAAAATCATACAATACAACAATTGAAGAATTATCTG GAAGAAACAGTGTAGATGTTAGTATCAATGTAAATAATAAACTTAAGTCATTAGGTCTTTTAAATAATACAACACAAGCA TACTATGGATTTTATGGTGAACTACCCACAATAGTTCCACTTGTTATTCAAAATAATGCAATGTTAATAGAAGATTCATC AAATCATGGGGATATAAGTGATTATATTAAAGAAAATAACGTTTCAAAAATAACACTTACAAGAAATACAGAATCAGATT ATATACAAATGGAAGAATCAGATTATATATCATCAAAAATTATAGATGAATTTAGAGAAAATAATATAGATACAGAATTT CTTACAAATAACAGAACACTAGATGAAGCCACAGGATTGTATGATGTGAAAATAAACAGTATTGAAAATGTTAAAAATCA TACAAAATATATAAATAACACTACAACTGGAAAAAGTATGGAATCAAGTCCTCCATTAATAGAAATGCTTAATTATACAT CTGTAGTTGACTCAAATAATATATCTGCAAATATAACAAATAATAACAACACATATAATGTAAAATGGAGTACAATACAT CCATATACTTGGAAAAAAATCAGTAATAATGCTTATTATGCAACATCAAATACTGGATATGAATACTTCTGGAATTATGA TGAAAATACATGGACTGTTGACTATAAATACAATAACACATCATATTATCAAGTTAAATGGATAAAAAATACTGATAATA CATGGACTGAAATGCATCCTACAAATAACTACACATGGAACTATGATGGAAATAAATGGGCATGCTATAAAAATTCACAA ATGATATATTATATATCTAAAAAATAA
Upstream 100 bases:
>100_bases CTAAAACATGATACACCAATACCCATATATGCACAAAATATATACTCAAATTCAAATTATAAAATATGTATTATAAAAGA TAGTTACAGGAAATAAGATA
Downstream 100 bases:
>100_bases CCACCTCTTTATCAAATTTCTTTTTTTTAAATAAAAAAATGTATAATTTATAAAAAGTATATAATAATACATATAATAAA AAACTATTTTATTTAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MKYKILAIIVIVVLLGIFSTKFLYTDSMDIDNNTLVISVCTGNMRGLETGISVYAGYNKAPLVLSDRTLPQQLDSWLPSF IKKNNIKKIVVVGPITAKQLLQLHMCGVEVKQVYGKSIPDILTKVADNTPTKNNDTLIFSASDPLAGVLGAYIKTPVFIT ATNETYNSADVLDTKYDEYIKTHNISHIIIVGNLPESLKNQLKSYNTTIEELSGRNSVDVSINVNNKLKSLGLLNNTTQA YYGFYGELPTIVPLVIQNNAMLIEDSSNHGDISDYIKENNVSKITLTRNTESDYIQMEESDYISSKIIDEFRENNIDTEF LTNNRTLDEATGLYDVKINSIENVKNHTKYINNTTTGKSMESSPPLIEMLNYTSVVDSNNISANITNNNNTYNVKWSTIH PYTWKKISNNAYYATSNTGYEYFWNYDENTWTVDYKYNNTSYYQVKWIKNTDNTWTEMHPTNNYTWNYDGNKWACYKNSQ MIYYISKK
Sequences:
>Translated_488_residues MKYKILAIIVIVVLLGIFSTKFLYTDSMDIDNNTLVISVCTGNMRGLETGISVYAGYNKAPLVLSDRTLPQQLDSWLPSF IKKNNIKKIVVVGPITAKQLLQLHMCGVEVKQVYGKSIPDILTKVADNTPTKNNDTLIFSASDPLAGVLGAYIKTPVFIT ATNETYNSADVLDTKYDEYIKTHNISHIIIVGNLPESLKNQLKSYNTTIEELSGRNSVDVSINVNNKLKSLGLLNNTTQA YYGFYGELPTIVPLVIQNNAMLIEDSSNHGDISDYIKENNVSKITLTRNTESDYIQMEESDYISSKIIDEFRENNIDTEF LTNNRTLDEATGLYDVKINSIENVKNHTKYINNTTTGKSMESSPPLIEMLNYTSVVDSNNISANITNNNNTYNVKWSTIH PYTWKKISNNAYYATSNTGYEYFWNYDENTWTVDYKYNNTSYYQVKWIKNTDNTWTEMHPTNNYTWNYDGNKWACYKNSQ MIYYISKK >Mature_488_residues MKYKILAIIVIVVLLGIFSTKFLYTDSMDIDNNTLVISVCTGNMRGLETGISVYAGYNKAPLVLSDRTLPQQLDSWLPSF IKKNNIKKIVVVGPITAKQLLQLHMCGVEVKQVYGKSIPDILTKVADNTPTKNNDTLIFSASDPLAGVLGAYIKTPVFIT ATNETYNSADVLDTKYDEYIKTHNISHIIIVGNLPESLKNQLKSYNTTIEELSGRNSVDVSINVNNKLKSLGLLNNTTQA YYGFYGELPTIVPLVIQNNAMLIEDSSNHGDISDYIKENNVSKITLTRNTESDYIQMEESDYISSKIIDEFRENNIDTEF LTNNRTLDEATGLYDVKINSIENVKNHTKYINNTTTGKSMESSPPLIEMLNYTSVVDSNNISANITNNNNTYNVKWSTIH PYTWKKISNNAYYATSNTGYEYFWNYDENTWTVDYKYNNTSYYQVKWIKNTDNTWTEMHPTNNYTWNYDGNKWACYKNSQ MIYYISKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55617; Mature: 55617
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYKILAIIVIVVLLGIFSTKFLYTDSMDIDNNTLVISVCTGNMRGLETGISVYAGYNKA CCEEHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEEECCCCCCHHCCEEEEECCCCC PLVLSDRTLPQQLDSWLPSFIKKNNIKKIVVVGPITAKQLLQLHMCGVEVKQVYGKSIPD CEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHCCCHHH ILTKVADNTPTKNNDTLIFSASDPLAGVLGAYIKTPVFITATNETYNSADVLDTKYDEYI HHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHH KTHNISHIIIVGNLPESLKNQLKSYNTTIEELSGRNSVDVSINVNNKLKSLGLLNNTTQA HHCCCEEEEEECCCCHHHHHHHHHHCCHHHHHCCCCCEEEEEEECCCHHHCCCCCCCCHH YYGFYGELPTIVPLVIQNNAMLIEDSSNHGDISDYIKENNVSKITLTRNTESDYIQMEES EEEECCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHCCCCEEEEEEECCCCCEEEECCC DYISSKIIDEFRENNIDTEFLTNNRTLDEATGLYDVKINSIENVKNHTKYINNTTTGKSM HHHHHHHHHHHHHCCCCCEEEECCCCCHHHCCEEEEEECCHHHHHHHHHCCCCCCCCCCC ESSPPLIEMLNYTSVVDSNNISANITNNNNTYNVKWSTIHPYTWKKISNNAYYATSNTGY CCCCCHHHHHCHHEEECCCCEEEEEECCCCEEEEEEEEECCEEEEEECCCEEEEECCCCE EYFWNYDENTWTVDYKYNNTSYYQVKWIKNTDNTWTEMHPTNNYTWNYDGNKWACYKNSQ EEEEEECCCEEEEEEEECCCEEEEEEEEECCCCCEEEECCCCCEEECCCCCEEEEEECCE MIYYISKK EEEEEECC >Mature Secondary Structure MKYKILAIIVIVVLLGIFSTKFLYTDSMDIDNNTLVISVCTGNMRGLETGISVYAGYNKA CCEEHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEEECCCCCCHHCCEEEEECCCCC PLVLSDRTLPQQLDSWLPSFIKKNNIKKIVVVGPITAKQLLQLHMCGVEVKQVYGKSIPD CEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHCCCHHH ILTKVADNTPTKNNDTLIFSASDPLAGVLGAYIKTPVFITATNETYNSADVLDTKYDEYI HHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHH KTHNISHIIIVGNLPESLKNQLKSYNTTIEELSGRNSVDVSINVNNKLKSLGLLNNTTQA HHCCCEEEEEECCCCHHHHHHHHHHCCHHHHHCCCCCEEEEEEECCCHHHCCCCCCCCHH YYGFYGELPTIVPLVIQNNAMLIEDSSNHGDISDYIKENNVSKITLTRNTESDYIQMEES EEEECCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHCCCCEEEEEEECCCCCEEEECCC DYISSKIIDEFRENNIDTEFLTNNRTLDEATGLYDVKINSIENVKNHTKYINNTTTGKSM HHHHHHHHHHHHHCCCCCEEEECCCCCHHHCCEEEEEECCHHHHHHHHHCCCCCCCCCCC ESSPPLIEMLNYTSVVDSNNISANITNNNNTYNVKWSTIHPYTWKKISNNAYYATSNTGY CCCCCHHHHHCHHEEECCCCEEEEEECCCCEEEEEEEEECCEEEEEECCCEEEEECCCCE EYFWNYDENTWTVDYKYNNTSYYQVKWIKNTDNTWTEMHPTNNYTWNYDGNKWACYKNSQ EEEEEECCCEEEEEEEECCCEEEEEEEEECCCCCEEEECCCCCEEECCCCCEEEEEECCE MIYYISKK EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA