Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489089

Identifier: 84489089

GI number: 84489089

Start: 326448

End: 327914

Strand: Direct

Name: 84489089

Synonym: Msp_0262

Alternate gene names: NA

Gene position: 326448-327914 (Clockwise)

Preceding gene: 84489088

Following gene: 84489090

Centisome position: 18.47

GC content: 27.06

Gene sequence:

>1467_bases
ATGAAATATAAAATATTAGCAATCATAGTAATTGTAGTACTACTTGGTATATTTTCTACTAAATTCCTCTACACAGATTC
TATGGATATTGATAATAATACACTGGTAATATCAGTATGTACTGGGAATATGAGGGGATTGGAAACAGGAATTTCTGTAT
ATGCTGGATATAATAAAGCACCACTAGTACTATCTGATAGAACATTACCTCAACAATTAGATTCATGGTTACCATCATTT
ATTAAAAAAAACAATATTAAGAAAATAGTGGTTGTTGGACCTATCACTGCTAAACAACTACTACAACTACATATGTGTGG
TGTTGAAGTTAAACAAGTCTATGGTAAATCTATACCAGACATATTAACAAAAGTTGCAGATAACACTCCAACTAAAAATA
ATGATACACTTATATTTTCAGCATCAGATCCACTTGCAGGAGTTCTTGGAGCATATATAAAAACACCAGTTTTTATCACA
GCAACAAATGAAACATATAATTCTGCAGATGTATTAGATACAAAATATGATGAATATATTAAAACACATAATATCTCACA
CATAATAATCGTGGGAAATCTACCAGAATCTCTTAAAAATCAGTTAAAATCATACAATACAACAATTGAAGAATTATCTG
GAAGAAACAGTGTAGATGTTAGTATCAATGTAAATAATAAACTTAAGTCATTAGGTCTTTTAAATAATACAACACAAGCA
TACTATGGATTTTATGGTGAACTACCCACAATAGTTCCACTTGTTATTCAAAATAATGCAATGTTAATAGAAGATTCATC
AAATCATGGGGATATAAGTGATTATATTAAAGAAAATAACGTTTCAAAAATAACACTTACAAGAAATACAGAATCAGATT
ATATACAAATGGAAGAATCAGATTATATATCATCAAAAATTATAGATGAATTTAGAGAAAATAATATAGATACAGAATTT
CTTACAAATAACAGAACACTAGATGAAGCCACAGGATTGTATGATGTGAAAATAAACAGTATTGAAAATGTTAAAAATCA
TACAAAATATATAAATAACACTACAACTGGAAAAAGTATGGAATCAAGTCCTCCATTAATAGAAATGCTTAATTATACAT
CTGTAGTTGACTCAAATAATATATCTGCAAATATAACAAATAATAACAACACATATAATGTAAAATGGAGTACAATACAT
CCATATACTTGGAAAAAAATCAGTAATAATGCTTATTATGCAACATCAAATACTGGATATGAATACTTCTGGAATTATGA
TGAAAATACATGGACTGTTGACTATAAATACAATAACACATCATATTATCAAGTTAAATGGATAAAAAATACTGATAATA
CATGGACTGAAATGCATCCTACAAATAACTACACATGGAACTATGATGGAAATAAATGGGCATGCTATAAAAATTCACAA
ATGATATATTATATATCTAAAAAATAA

Upstream 100 bases:

>100_bases
CTAAAACATGATACACCAATACCCATATATGCACAAAATATATACTCAAATTCAAATTATAAAATATGTATTATAAAAGA
TAGTTACAGGAAATAAGATA

Downstream 100 bases:

>100_bases
CCACCTCTTTATCAAATTTCTTTTTTTTAAATAAAAAAATGTATAATTTATAAAAAGTATATAATAATACATATAATAAA
AAACTATTTTATTTAATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MKYKILAIIVIVVLLGIFSTKFLYTDSMDIDNNTLVISVCTGNMRGLETGISVYAGYNKAPLVLSDRTLPQQLDSWLPSF
IKKNNIKKIVVVGPITAKQLLQLHMCGVEVKQVYGKSIPDILTKVADNTPTKNNDTLIFSASDPLAGVLGAYIKTPVFIT
ATNETYNSADVLDTKYDEYIKTHNISHIIIVGNLPESLKNQLKSYNTTIEELSGRNSVDVSINVNNKLKSLGLLNNTTQA
YYGFYGELPTIVPLVIQNNAMLIEDSSNHGDISDYIKENNVSKITLTRNTESDYIQMEESDYISSKIIDEFRENNIDTEF
LTNNRTLDEATGLYDVKINSIENVKNHTKYINNTTTGKSMESSPPLIEMLNYTSVVDSNNISANITNNNNTYNVKWSTIH
PYTWKKISNNAYYATSNTGYEYFWNYDENTWTVDYKYNNTSYYQVKWIKNTDNTWTEMHPTNNYTWNYDGNKWACYKNSQ
MIYYISKK

Sequences:

>Translated_488_residues
MKYKILAIIVIVVLLGIFSTKFLYTDSMDIDNNTLVISVCTGNMRGLETGISVYAGYNKAPLVLSDRTLPQQLDSWLPSF
IKKNNIKKIVVVGPITAKQLLQLHMCGVEVKQVYGKSIPDILTKVADNTPTKNNDTLIFSASDPLAGVLGAYIKTPVFIT
ATNETYNSADVLDTKYDEYIKTHNISHIIIVGNLPESLKNQLKSYNTTIEELSGRNSVDVSINVNNKLKSLGLLNNTTQA
YYGFYGELPTIVPLVIQNNAMLIEDSSNHGDISDYIKENNVSKITLTRNTESDYIQMEESDYISSKIIDEFRENNIDTEF
LTNNRTLDEATGLYDVKINSIENVKNHTKYINNTTTGKSMESSPPLIEMLNYTSVVDSNNISANITNNNNTYNVKWSTIH
PYTWKKISNNAYYATSNTGYEYFWNYDENTWTVDYKYNNTSYYQVKWIKNTDNTWTEMHPTNNYTWNYDGNKWACYKNSQ
MIYYISKK
>Mature_488_residues
MKYKILAIIVIVVLLGIFSTKFLYTDSMDIDNNTLVISVCTGNMRGLETGISVYAGYNKAPLVLSDRTLPQQLDSWLPSF
IKKNNIKKIVVVGPITAKQLLQLHMCGVEVKQVYGKSIPDILTKVADNTPTKNNDTLIFSASDPLAGVLGAYIKTPVFIT
ATNETYNSADVLDTKYDEYIKTHNISHIIIVGNLPESLKNQLKSYNTTIEELSGRNSVDVSINVNNKLKSLGLLNNTTQA
YYGFYGELPTIVPLVIQNNAMLIEDSSNHGDISDYIKENNVSKITLTRNTESDYIQMEESDYISSKIIDEFRENNIDTEF
LTNNRTLDEATGLYDVKINSIENVKNHTKYINNTTTGKSMESSPPLIEMLNYTSVVDSNNISANITNNNNTYNVKWSTIH
PYTWKKISNNAYYATSNTGYEYFWNYDENTWTVDYKYNNTSYYQVKWIKNTDNTWTEMHPTNNYTWNYDGNKWACYKNSQ
MIYYISKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55617; Mature: 55617

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKILAIIVIVVLLGIFSTKFLYTDSMDIDNNTLVISVCTGNMRGLETGISVYAGYNKA
CCEEHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEEECCCCCCHHCCEEEEECCCCC
PLVLSDRTLPQQLDSWLPSFIKKNNIKKIVVVGPITAKQLLQLHMCGVEVKQVYGKSIPD
CEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHCCCHHH
ILTKVADNTPTKNNDTLIFSASDPLAGVLGAYIKTPVFITATNETYNSADVLDTKYDEYI
HHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHH
KTHNISHIIIVGNLPESLKNQLKSYNTTIEELSGRNSVDVSINVNNKLKSLGLLNNTTQA
HHCCCEEEEEECCCCHHHHHHHHHHCCHHHHHCCCCCEEEEEEECCCHHHCCCCCCCCHH
YYGFYGELPTIVPLVIQNNAMLIEDSSNHGDISDYIKENNVSKITLTRNTESDYIQMEES
EEEECCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHCCCCEEEEEEECCCCCEEEECCC
DYISSKIIDEFRENNIDTEFLTNNRTLDEATGLYDVKINSIENVKNHTKYINNTTTGKSM
HHHHHHHHHHHHHCCCCCEEEECCCCCHHHCCEEEEEECCHHHHHHHHHCCCCCCCCCCC
ESSPPLIEMLNYTSVVDSNNISANITNNNNTYNVKWSTIHPYTWKKISNNAYYATSNTGY
CCCCCHHHHHCHHEEECCCCEEEEEECCCCEEEEEEEEECCEEEEEECCCEEEEECCCCE
EYFWNYDENTWTVDYKYNNTSYYQVKWIKNTDNTWTEMHPTNNYTWNYDGNKWACYKNSQ
EEEEEECCCEEEEEEEECCCEEEEEEEEECCCCCEEEECCCCCEEECCCCCEEEEEECCE
MIYYISKK
EEEEEECC
>Mature Secondary Structure
MKYKILAIIVIVVLLGIFSTKFLYTDSMDIDNNTLVISVCTGNMRGLETGISVYAGYNKA
CCEEHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEEECCCCCCHHCCEEEEECCCCC
PLVLSDRTLPQQLDSWLPSFIKKNNIKKIVVVGPITAKQLLQLHMCGVEVKQVYGKSIPD
CEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHCCCHHH
ILTKVADNTPTKNNDTLIFSASDPLAGVLGAYIKTPVFITATNETYNSADVLDTKYDEYI
HHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHH
KTHNISHIIIVGNLPESLKNQLKSYNTTIEELSGRNSVDVSINVNNKLKSLGLLNNTTQA
HHCCCEEEEEECCCCHHHHHHHHHHCCHHHHHCCCCCEEEEEEECCCHHHCCCCCCCCHH
YYGFYGELPTIVPLVIQNNAMLIEDSSNHGDISDYIKENNVSKITLTRNTESDYIQMEES
EEEECCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHCCCCEEEEEEECCCCCEEEECCC
DYISSKIIDEFRENNIDTEFLTNNRTLDEATGLYDVKINSIENVKNHTKYINNTTTGKSM
HHHHHHHHHHHHHCCCCCEEEECCCCCHHHCCEEEEEECCHHHHHHHHHCCCCCCCCCCC
ESSPPLIEMLNYTSVVDSNNISANITNNNNTYNVKWSTIHPYTWKKISNNAYYATSNTGY
CCCCCHHHHHCHHEEECCCCEEEEEECCCCEEEEEEEEECCEEEEEECCCEEEEECCCCE
EYFWNYDENTWTVDYKYNNTSYYQVKWIKNTDNTWTEMHPTNNYTWNYDGNKWACYKNSQ
EEEEEECCCEEEEEEEECCCEEEEEEEEECCCCCEEEECCCCCEEECCCCCEEEEEECCE
MIYYISKK
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA