Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489088
Identifier: 84489088
GI number: 84489088
Start: 324911
End: 326443
Strand: Direct
Name: 84489088
Synonym: Msp_0261
Alternate gene names: NA
Gene position: 324911-326443 (Clockwise)
Preceding gene: 84489086
Following gene: 84489089
Centisome position: 18.38
GC content: 27.33
Gene sequence:
>1533_bases ATGAATATTAACTTTAATAATAAGAAATTAATTCTATTACCAGCAACTATCACATGTATCATATCCTTATTGTTAGTATA TAAATTTACATTTCCAATATCATGGGATGTATATTATCATATACATATGGCTAATTTATATATGACAAATGGCCTTGTAT TTTGGGATTATTCAACAGTAGCACCACATGGTAGACTCATAATGTATCCTCCATTGTTTCATTTGTTTTTAGCAACAATT TCAAACATAACACATATATCCCTTGTTAATATTACTAGATTTTTACAACCAGTATTTGCATTCTTTGTAATCTATATTAT ATCCTACTCATCATACAGATTATACTCAATAAAGCATGGTGTAATTACGGGTTTTCTTGGAATGTTATCCTTTGTAACAT TTAATAGATCAGTAATATGTACTCCTGCAACAATTGCCATTGCACTTTCAATGATTGTATGTGTGCTATTTTTTATTGGA TTTAGAGATAATAATAAGAAAGACATACTATTATCAGCAATATTTCTAGGATTAATATGTAATCTACACATGGCAACATC CATCATGACAATTGGGGTTGTAGGGTTATATGGTCTTATACAATTAGTTAGAAAACAATTAAATAGTAAATATCTTTTAA TATACATTATAATATCCATGATTATAGCACTACCATGGTGGTTATATATTCTGATAAATTATGGGTTATTTTTCAATTCA ATAGCAGGAAATCCACTTTTTATTGGAGTATATTTCTATAAATATTATGGTATTATTCCATTGTTATTTACTATAATAGG ATTTTACACATTATATAAAAACAAATCTAATAAATCACTATTTCTATTAGTATGGTCTTTATCATTGGTACTACTAAGTC AAGTAACATATCTTGGGATAGAAACAGTTTCAATTAGAATTCTAGAAGTGGCAAGTTATCCATTAATACTAATTAGTGGT GTAGGATTTATAGAAGTATGTAATTACATTAAAAATAAAAATATGGAGAAATTATTAGTAATACTTCTTGTTATATTCTC AGTACTAAGTGTAGTTGCATATGTGGATAGTTATACACCTGATGTATTAGCAGATAATGATTATAATACTACACTTATTC CAACAGAGATGCATATGGTAATAGATCCTATTGGAACAATATCAAAACCATCTATTATATCTTCCAGATTTTCTGATGCA ACTTTAGCTCATGACAGATACCATGTCATGTCTTGGTTTGTAAATAATAGTGATGGATCACTTCTTGTATCAGAAGATTC TGTTATGGATACAATTGTTGTATCAACTAGTAATACACCAGTTGTTTATGGAGGATTTACTGAATCTATTCCAGTGTATG TTGTAGATCCTGTACATATAATAGAAAATCATTCAACAGAAAGTGAGTTATCTGATTTAGGTGTAGGTTATATATTACTA AAACATGATACACCAATACCCATATATGCACAAAATATATACTCAAATTCAAATTATAAAATATGTATTATAAAAGATAG TTACAGGAAATAA
Upstream 100 bases:
>100_bases ATTTTCTTTTCATGTAATTATTTTAGTAAAGATAAAAAACTATTACAATTATAACTATTAATTATAATTATAATTATAAA AATAATCTAAAGGGACATCT
Downstream 100 bases:
>100_bases GATAATGAAATATAAAATATTAGCAATCATAGTAATTGTAGTACTACTTGGTATATTTTCTACTAAATTCCTCTACACAG ATTCTATGGATATTGATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MNINFNNKKLILLPATITCIISLLLVYKFTFPISWDVYYHIHMANLYMTNGLVFWDYSTVAPHGRLIMYPPLFHLFLATI SNITHISLVNITRFLQPVFAFFVIYIISYSSYRLYSIKHGVITGFLGMLSFVTFNRSVICTPATIAIALSMIVCVLFFIG FRDNNKKDILLSAIFLGLICNLHMATSIMTIGVVGLYGLIQLVRKQLNSKYLLIYIIISMIIALPWWLYILINYGLFFNS IAGNPLFIGVYFYKYYGIIPLLFTIIGFYTLYKNKSNKSLFLLVWSLSLVLLSQVTYLGIETVSIRILEVASYPLILISG VGFIEVCNYIKNKNMEKLLVILLVIFSVLSVVAYVDSYTPDVLADNDYNTTLIPTEMHMVIDPIGTISKPSIISSRFSDA TLAHDRYHVMSWFVNNSDGSLLVSEDSVMDTIVVSTSNTPVVYGGFTESIPVYVVDPVHIIENHSTESELSDLGVGYILL KHDTPIPIYAQNIYSNSNYKICIIKDSYRK
Sequences:
>Translated_510_residues MNINFNNKKLILLPATITCIISLLLVYKFTFPISWDVYYHIHMANLYMTNGLVFWDYSTVAPHGRLIMYPPLFHLFLATI SNITHISLVNITRFLQPVFAFFVIYIISYSSYRLYSIKHGVITGFLGMLSFVTFNRSVICTPATIAIALSMIVCVLFFIG FRDNNKKDILLSAIFLGLICNLHMATSIMTIGVVGLYGLIQLVRKQLNSKYLLIYIIISMIIALPWWLYILINYGLFFNS IAGNPLFIGVYFYKYYGIIPLLFTIIGFYTLYKNKSNKSLFLLVWSLSLVLLSQVTYLGIETVSIRILEVASYPLILISG VGFIEVCNYIKNKNMEKLLVILLVIFSVLSVVAYVDSYTPDVLADNDYNTTLIPTEMHMVIDPIGTISKPSIISSRFSDA TLAHDRYHVMSWFVNNSDGSLLVSEDSVMDTIVVSTSNTPVVYGGFTESIPVYVVDPVHIIENHSTESELSDLGVGYILL KHDTPIPIYAQNIYSNSNYKICIIKDSYRK >Mature_510_residues MNINFNNKKLILLPATITCIISLLLVYKFTFPISWDVYYHIHMANLYMTNGLVFWDYSTVAPHGRLIMYPPLFHLFLATI SNITHISLVNITRFLQPVFAFFVIYIISYSSYRLYSIKHGVITGFLGMLSFVTFNRSVICTPATIAIALSMIVCVLFFIG FRDNNKKDILLSAIFLGLICNLHMATSIMTIGVVGLYGLIQLVRKQLNSKYLLIYIIISMIIALPWWLYILINYGLFFNS IAGNPLFIGVYFYKYYGIIPLLFTIIGFYTLYKNKSNKSLFLLVWSLSLVLLSQVTYLGIETVSIRILEVASYPLILISG VGFIEVCNYIKNKNMEKLLVILLVIFSVLSVVAYVDSYTPDVLADNDYNTTLIPTEMHMVIDPIGTISKPSIISSRFSDA TLAHDRYHVMSWFVNNSDGSLLVSEDSVMDTIVVSTSNTPVVYGGFTESIPVYVVDPVHIIENHSTESELSDLGVGYILL KHDTPIPIYAQNIYSNSNYKICIIKDSYRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57808; Mature: 57808
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNINFNNKKLILLPATITCIISLLLVYKFTFPISWDVYYHIHMANLYMTNGLVFWDYSTV CCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEECCEEEEECCCC APHGRLIMYPPLFHLFLATISNITHISLVNITRFLQPVFAFFVIYIISYSSYRLYSIKHG CCCCCEEECCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHH VITGFLGMLSFVTFNRSVICTPATIAIALSMIVCVLFFIGFRDNNKKDILLSAIFLGLIC HHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH NLHMATSIMTIGVVGLYGLIQLVRKQLNSKYLLIYIIISMIIALPWWLYILINYGLFFNS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC IAGNPLFIGVYFYKYYGIIPLLFTIIGFYTLYKNKSNKSLFLLVWSLSLVLLSQVTYLGI CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCE ETVSIRILEVASYPLILISGVGFIEVCNYIKNKNMEKLLVILLVIFSVLSVVAYVDSYTP EEEEEEEEEECCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC DVLADNDYNTTLIPTEMHMVIDPIGTISKPSIISSRFSDATLAHDRYHVMSWFVNNSDGS CCEECCCCCCEEECCHHEEEECCCCCCCCCCHHHHCCCCCHHCCCCEEEEEEEEECCCCC LLVSEDSVMDTIVVSTSNTPVVYGGFTESIPVYVVDPVHIIENHSTESELSDLGVGYILL EEEECCCCEEEEEEECCCCCEEECCCCCCCCEEEECCCCEECCCCCHHHHHHCCCEEEEE KHDTPIPIYAQNIYSNSNYKICIIKDSYRK ECCCCCCEEEEEEECCCCEEEEEEECCCCC >Mature Secondary Structure MNINFNNKKLILLPATITCIISLLLVYKFTFPISWDVYYHIHMANLYMTNGLVFWDYSTV CCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEECCEEEEECCCC APHGRLIMYPPLFHLFLATISNITHISLVNITRFLQPVFAFFVIYIISYSSYRLYSIKHG CCCCCEEECCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHH VITGFLGMLSFVTFNRSVICTPATIAIALSMIVCVLFFIGFRDNNKKDILLSAIFLGLIC HHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH NLHMATSIMTIGVVGLYGLIQLVRKQLNSKYLLIYIIISMIIALPWWLYILINYGLFFNS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC IAGNPLFIGVYFYKYYGIIPLLFTIIGFYTLYKNKSNKSLFLLVWSLSLVLLSQVTYLGI CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCE ETVSIRILEVASYPLILISGVGFIEVCNYIKNKNMEKLLVILLVIFSVLSVVAYVDSYTP EEEEEEEEEECCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC DVLADNDYNTTLIPTEMHMVIDPIGTISKPSIISSRFSDATLAHDRYHVMSWFVNNSDGS CCEECCCCCCEEECCHHEEEECCCCCCCCCCHHHHCCCCCHHCCCCEEEEEEEEECCCCC LLVSEDSVMDTIVVSTSNTPVVYGGFTESIPVYVVDPVHIIENHSTESELSDLGVGYILL EEEECCCCEEEEEEECCCCCEEECCCCCCCCEEEECCCCEECCCCCHHHHHHCCCEEEEE KHDTPIPIYAQNIYSNSNYKICIIKDSYRK ECCCCCCEEEEEEECCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA