Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is glmM [H]
Identifier: 84489090
GI number: 84489090
Start: 328052
End: 329395
Strand: Direct
Name: glmM [H]
Synonym: Msp_0263
Alternate gene names: 84489090
Gene position: 328052-329395 (Clockwise)
Preceding gene: 84489089
Following gene: 84489092
Centisome position: 18.56
GC content: 33.26
Gene sequence:
>1344_bases ATGAAACAATTATTTGGGACATTTGGTGTACGAAGAGTAGCAAACACAGTTTTAACTCCAGAATTTGCATCAAAAATTGC AGCAGCTTATGGAACAAAAGTTAAAGGAACAATAGCAATAGGATCAGATCCAAGAACATCCTCTGAAATGATAAAACACG CCGTTACAGCAGGATTATTATCAGTAGGATGTGATGTGGTTGATTTAGGAACACTACCAACACCTGCAGTACAGTATGCA GTAAGACAATACTATGATGGTGGAATCATGGTTACAGCTTCACATAATCCTCCAAAATATAATGGATTAAAATTATTGGA CTCTGATGGTATTGGAACTCCTGATGATTTGGAAGAAGAAATTGAAGATATTTACTTTAATGATAAACAAGAACGTGTAA CTTGGGATAAAATTGGAAAAGCATATAAAAGAGATATTATTGATGAATACATAGATGAAGTGCTAAAAAGAGTAGATGTA GACACAATAAAACAAGCAAATCTAAAAGTAATTCTAGATGCAGGATCTGGAGCTGCATGTTCAACAACACCATACATTAT AAGAAAATTGGGATGTGACATAACAACACTTAATTGTCAACCAGATGGAGCATTCCCTGGACGTAATCCAGAACCAACAG AAGATAATCTACAAGATCTTATAAAAGTAGTTAAGGCAACTGGTGCAGATATTGGAATTGCACATGATGGTGATGCAGAT AGAACAATATGTATTGATGAAAAAGGACAATTTGTTTTTGGAGATAAATCATTTGCACTTGTTGAAAAATCTATGCTTGA GAAGAACAATGGTGGAAAAATAGTAACTACAGTTGCAACAAGTAATGCAATAGCAGATATAGCACTTGAAAATAATGGTG AAATAATTCTAACAAAAGTAGGAGATCTTGTAGTTGCACGTAAATTACAGGAAGTAGATGGTTTATTTGGTGGAGAAGAA AATGGTGGATTAATATTCCCTGACTTTGTATATGGAAGAGATTCTGGACTAGCTACAGCAATGCTTCTTGAAATAATAGC TAAAACAAAACAACCACTATCCCAATTAATTAGTCAATTACCAACATACTTCTCAGAAAAAAGAAAAGTTGAATGTCCTG ATGATAAAAAAGCTACAGTTGCAGAAAATATAATTAAAGACACAACAGAATATGAAGTTGACACAACAGATGGTGTTAAA GTAATAACAAGTGATGGATGGGTAATAATAAGACCATCTGGTACAGAACCAATATATAGATGCTTCTCAGAAGCAAAAAC TCCTGAAAAAGCAACAGAATTAGCTGATTGGGGAATGAATTTAATTAAGAAATATTTAGATTAA
Upstream 100 bases:
>100_bases AATGTATAATTTATAAAAAGTATATAATAATACATATAATAAAAAACTATTTTATTTAATAAAGAAGAGTTAATTTAAGA ATATAGGAGAAGAAAAACAT
Downstream 100 bases:
>100_bases ATTTCTCTTCTTTCTACTTTTTTTATTTACAAGTCCCCATGGACAAACTTTAATACATAATCCACATAATCTTGGACGAT TTTGTGCCTCTAATTTATTA
Product: phosphomannomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MKQLFGTFGVRRVANTVLTPEFASKIAAAYGTKVKGTIAIGSDPRTSSEMIKHAVTAGLLSVGCDVVDLGTLPTPAVQYA VRQYYDGGIMVTASHNPPKYNGLKLLDSDGIGTPDDLEEEIEDIYFNDKQERVTWDKIGKAYKRDIIDEYIDEVLKRVDV DTIKQANLKVILDAGSGAACSTTPYIIRKLGCDITTLNCQPDGAFPGRNPEPTEDNLQDLIKVVKATGADIGIAHDGDAD RTICIDEKGQFVFGDKSFALVEKSMLEKNNGGKIVTTVATSNAIADIALENNGEIILTKVGDLVVARKLQEVDGLFGGEE NGGLIFPDFVYGRDSGLATAMLLEIIAKTKQPLSQLISQLPTYFSEKRKVECPDDKKATVAENIIKDTTEYEVDTTDGVK VITSDGWVIIRPSGTEPIYRCFSEAKTPEKATELADWGMNLIKKYLD
Sequences:
>Translated_447_residues MKQLFGTFGVRRVANTVLTPEFASKIAAAYGTKVKGTIAIGSDPRTSSEMIKHAVTAGLLSVGCDVVDLGTLPTPAVQYA VRQYYDGGIMVTASHNPPKYNGLKLLDSDGIGTPDDLEEEIEDIYFNDKQERVTWDKIGKAYKRDIIDEYIDEVLKRVDV DTIKQANLKVILDAGSGAACSTTPYIIRKLGCDITTLNCQPDGAFPGRNPEPTEDNLQDLIKVVKATGADIGIAHDGDAD RTICIDEKGQFVFGDKSFALVEKSMLEKNNGGKIVTTVATSNAIADIALENNGEIILTKVGDLVVARKLQEVDGLFGGEE NGGLIFPDFVYGRDSGLATAMLLEIIAKTKQPLSQLISQLPTYFSEKRKVECPDDKKATVAENIIKDTTEYEVDTTDGVK VITSDGWVIIRPSGTEPIYRCFSEAKTPEKATELADWGMNLIKKYLD >Mature_447_residues MKQLFGTFGVRRVANTVLTPEFASKIAAAYGTKVKGTIAIGSDPRTSSEMIKHAVTAGLLSVGCDVVDLGTLPTPAVQYA VRQYYDGGIMVTASHNPPKYNGLKLLDSDGIGTPDDLEEEIEDIYFNDKQERVTWDKIGKAYKRDIIDEYIDEVLKRVDV DTIKQANLKVILDAGSGAACSTTPYIIRKLGCDITTLNCQPDGAFPGRNPEPTEDNLQDLIKVVKATGADIGIAHDGDAD RTICIDEKGQFVFGDKSFALVEKSMLEKNNGGKIVTTVATSNAIADIALENNGEIILTKVGDLVVARKLQEVDGLFGGEE NGGLIFPDFVYGRDSGLATAMLLEIIAKTKQPLSQLISQLPTYFSEKRKVECPDDKKATVAENIIKDTTEYEVDTTDGVK VITSDGWVIIRPSGTEPIYRCFSEAKTPEKATELADWGMNLIKKYLD
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI21361621, Length=376, Percent_Identity=25.531914893617, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI290463102, Length=332, Percent_Identity=26.2048192771084, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1788361, Length=442, Percent_Identity=30.5429864253394, Blast_Score=179, Evalue=3e-46, Organism=Escherichia coli, GI1789566, Length=447, Percent_Identity=31.7673378076063, Blast_Score=166, Evalue=4e-42, Organism=Caenorhabditis elegans, GI17535441, Length=416, Percent_Identity=26.4423076923077, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI17864244, Length=494, Percent_Identity=23.8866396761134, Blast_Score=78, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 48635; Mature: 48635
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLFGTFGVRRVANTVLTPEFASKIAAAYGTKVKGTIAIGSDPRTSSEMIKHAVTAGLL CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHH SVGCDVVDLGTLPTPAVQYAVRQYYDGGIMVTASHNPPKYNGLKLLDSDGIGTPDDLEEE HHCCCEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCHHHHHH IEDIYFNDKQERVTWDKIGKAYKRDIIDEYIDEVLKRVDVDTIKQANLKVILDAGSGAAC HHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEECCCCCCC STTPYIIRKLGCDITTLNCQPDGAFPGRNPEPTEDNLQDLIKVVKATGADIGIAHDGDAD CCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC RTICIDEKGQFVFGDKSFALVEKSMLEKNNGGKIVTTVATSNAIADIALENNGEIILTKV CEEEEECCCCEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCEEEEEH GDLVVARKLQEVDGLFGGEENGGLIFPDFVYGRDSGLATAMLLEIIAKTKQPLSQLISQL HHHHHHHHHHHHHHCCCCCCCCCEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH PTYFSEKRKVECPDDKKATVAENIIKDTTEYEVDTTDGVKVITSDGWVIIRPSGTEPIYR HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEECCCEEEEECCCCCHHHH CFSEAKTPEKATELADWGMNLIKKYLD HHHHCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKQLFGTFGVRRVANTVLTPEFASKIAAAYGTKVKGTIAIGSDPRTSSEMIKHAVTAGLL CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHH SVGCDVVDLGTLPTPAVQYAVRQYYDGGIMVTASHNPPKYNGLKLLDSDGIGTPDDLEEE HHCCCEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCHHHHHH IEDIYFNDKQERVTWDKIGKAYKRDIIDEYIDEVLKRVDVDTIKQANLKVILDAGSGAAC HHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEECCCCCCC STTPYIIRKLGCDITTLNCQPDGAFPGRNPEPTEDNLQDLIKVVKATGADIGIAHDGDAD CCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC RTICIDEKGQFVFGDKSFALVEKSMLEKNNGGKIVTTVATSNAIADIALENNGEIILTKV CEEEEECCCCEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCEEEEEH GDLVVARKLQEVDGLFGGEENGGLIFPDFVYGRDSGLATAMLLEIIAKTKQPLSQLISQL HHHHHHHHHHHHHHCCCCCCCCCEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH PTYFSEKRKVECPDDKKATVAENIIKDTTEYEVDTTDGVKVITSDGWVIIRPSGTEPIYR HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEECCCEEEEECCCCCHHHH CFSEAKTPEKATELADWGMNLIKKYLD HHHHCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]