Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489044

Identifier: 84489044

GI number: 84489044

Start: 269029

End: 270165

Strand: Direct

Name: 84489044

Synonym: Msp_0216

Alternate gene names: NA

Gene position: 269029-270165 (Clockwise)

Preceding gene: 84489043

Following gene: 84489045

Centisome position: 15.22

GC content: 18.91

Gene sequence:

>1137_bases
ATGCCTGATAATAATTGTGATGAGGATGTTTTAGAAATAATAGATTATTATAAAACTCAAAGTAACATCCCAATATCTGT
AATGAAACAAGAATTTAACTATAATCAAGTAAATGGTGAATATATATTCTTATGTAATTCTAAAGATTGGTTATCTATGG
TAGCTTTAGATTATATTTATAATATTGCTAAAGAAAATAATTCTGACATTGTACTAAGTTCAGTAAATATTTATGATGAG
AAATTAAAATCCATATATGAATTAGATTATGGTTTAAGTAATGATTTTATGAATTCTAATTCATTATCTCATAAATTATT
TTCAAATGAACTTTTTAGTATGGTAAAATATCCATATAATCTTTATAAAACTTCGTTTTTAGAGAAAATAGATGCGGATT
TAAATTTAAATGAATATGATATTGGATTTTTCTTCTTTAAAACTGTTTTCAATACATCAAAAATTTCATTTAGTATGGAA
CCTATTTTGAATATAAGAAAAAAAGAAAGTGATCTATATTATTTTATGGCTAATGATTTTAATAGAAACTTAAATAAAGA
ATATGTTTCATTTGACGTAGATTCTTTTTTCAAGAGTATGGAGAATATAAAATCTTTTTTTAGAGAAAAAGGAATATATG
ATCTTTATAAATATGATTTAACTAATTATTTTATGAATATATATAGAAATATTTGTACTTTTAATATGGAAAATGAAGAA
GTTTTTTATAAAAAATTACATGAAACTATTCTAAATTATTATAAAACAAATCATACAGATTATCTATTAAATTTAACTTC
ACCTAATATGGAATTTTATAGAATTCTTCTAAAATCAAAAAGTAAATTTGAAGTAGATGCTTTATATAAAATAAATGATT
TAAAACTTGAAAATGAAAAATTAAGTAGAGAAGTTAATAAGTTAACTAAATTATTAAAAGAAGAAAAAAACTTAAAAAAT
AAAGAAATAAAACAAAATAAAAAAATAAGACATAAATTAGATGAAGTTTTAAATTCTAATTCATGGAAATTAATGAATGG
ATTTAGAATGATAGGACTTTATAAGTCAGTTGCTTTAGTTATTTTTATTCTTTTATTAATTATTTCTATTATGATTATTT
TAATAATAAAATATTAA

Upstream 100 bases:

>100_bases
AATTTCTCTCTGTTTATCAGTTTTTCCAGATAAAAAATCAACAGCAGAGTGTTTTGAAAGCTTACTTAATCAAACATTAG
ATGAAATTGAAATTATATGT

Downstream 100 bases:

>100_bases
TTAAATACAACAAACATATATTAAAAATCGTGATAATTATGAAAATTGGGATTGTACTTGGAACTAGACCTGAAATAATT
AAAATGGCGCCTGTAATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MPDNNCDEDVLEIIDYYKTQSNIPISVMKQEFNYNQVNGEYIFLCNSKDWLSMVALDYIYNIAKENNSDIVLSSVNIYDE
KLKSIYELDYGLSNDFMNSNSLSHKLFSNELFSMVKYPYNLYKTSFLEKIDADLNLNEYDIGFFFFKTVFNTSKISFSME
PILNIRKKESDLYYFMANDFNRNLNKEYVSFDVDSFFKSMENIKSFFREKGIYDLYKYDLTNYFMNIYRNICTFNMENEE
VFYKKLHETILNYYKTNHTDYLLNLTSPNMEFYRILLKSKSKFEVDALYKINDLKLENEKLSREVNKLTKLLKEEKNLKN
KEIKQNKKIRHKLDEVLNSNSWKLMNGFRMIGLYKSVALVIFILLLIISIMIILIIKY

Sequences:

>Translated_378_residues
MPDNNCDEDVLEIIDYYKTQSNIPISVMKQEFNYNQVNGEYIFLCNSKDWLSMVALDYIYNIAKENNSDIVLSSVNIYDE
KLKSIYELDYGLSNDFMNSNSLSHKLFSNELFSMVKYPYNLYKTSFLEKIDADLNLNEYDIGFFFFKTVFNTSKISFSME
PILNIRKKESDLYYFMANDFNRNLNKEYVSFDVDSFFKSMENIKSFFREKGIYDLYKYDLTNYFMNIYRNICTFNMENEE
VFYKKLHETILNYYKTNHTDYLLNLTSPNMEFYRILLKSKSKFEVDALYKINDLKLENEKLSREVNKLTKLLKEEKNLKN
KEIKQNKKIRHKLDEVLNSNSWKLMNGFRMIGLYKSVALVIFILLLIISIMIILIIKY
>Mature_377_residues
PDNNCDEDVLEIIDYYKTQSNIPISVMKQEFNYNQVNGEYIFLCNSKDWLSMVALDYIYNIAKENNSDIVLSSVNIYDEK
LKSIYELDYGLSNDFMNSNSLSHKLFSNELFSMVKYPYNLYKTSFLEKIDADLNLNEYDIGFFFFKTVFNTSKISFSMEP
ILNIRKKESDLYYFMANDFNRNLNKEYVSFDVDSFFKSMENIKSFFREKGIYDLYKYDLTNYFMNIYRNICTFNMENEEV
FYKKLHETILNYYKTNHTDYLLNLTSPNMEFYRILLKSKSKFEVDALYKINDLKLENEKLSREVNKLTKLLKEEKNLKNK
EIKQNKKIRHKLDEVLNSNSWKLMNGFRMIGLYKSVALVIFILLLIISIMIILIIKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45309; Mature: 45178

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDNNCDEDVLEIIDYYKTQSNIPISVMKQEFNYNQVNGEYIFLCNSKDWLSMVALDYIY
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEECCCEEEEECCCHHHHHHHHHHHH
NIAKENNSDIVLSSVNIYDEKLKSIYELDYGLSNDFMNSNSLSHKLFSNELFSMVKYPYN
HHHCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH
LYKTSFLEKIDADLNLNEYDIGFFFFKTVFNTSKISFSMEPILNIRKKESDLYYFMANDF
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCEEEEEECCC
NRNLNKEYVSFDVDSFFKSMENIKSFFREKGIYDLYKYDLTNYFMNIYRNICTFNMENEE
CCCCCHHHHEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
VFYKKLHETILNYYKTNHTDYLLNLTSPNMEFYRILLKSKSKFEVDALYKINDLKLENEK
HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCEECHHH
LSREVNKLTKLLKEEKNLKNKEIKQNKKIRHKLDEVLNSNSWKLMNGFRMIGLYKSVALV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
IFILLLIISIMIILIIKY
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PDNNCDEDVLEIIDYYKTQSNIPISVMKQEFNYNQVNGEYIFLCNSKDWLSMVALDYIY
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEECCCEEEEECCCHHHHHHHHHHHH
NIAKENNSDIVLSSVNIYDEKLKSIYELDYGLSNDFMNSNSLSHKLFSNELFSMVKYPYN
HHHCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH
LYKTSFLEKIDADLNLNEYDIGFFFFKTVFNTSKISFSMEPILNIRKKESDLYYFMANDF
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCEEEEEECCC
NRNLNKEYVSFDVDSFFKSMENIKSFFREKGIYDLYKYDLTNYFMNIYRNICTFNMENEE
CCCCCHHHHEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
VFYKKLHETILNYYKTNHTDYLLNLTSPNMEFYRILLKSKSKFEVDALYKINDLKLENEK
HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCEECHHH
LSREVNKLTKLLKEEKNLKNKEIKQNKKIRHKLDEVLNSNSWKLMNGFRMIGLYKSVALV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
IFILLLIISIMIILIIKY
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA