Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489041
Identifier: 84489041
GI number: 84489041
Start: 264131
End: 264592
Strand: Direct
Name: 84489041
Synonym: Msp_0213
Alternate gene names: NA
Gene position: 264131-264592 (Clockwise)
Preceding gene: 84489038
Following gene: 84489042
Centisome position: 14.94
GC content: 25.54
Gene sequence:
>462_bases ATGAAAAATAATCAGGTAATTATTCTTTTAATATTGGGTATAGTTGCACTATTGGGAATTTCTATTTATGCGGGAATATT TAGTTTCAGTGATAATTCAACTAACAATTCAACTACTTTTAATATAACACCACCTTCTGGATATAGTATATCCAATCAAA CAAATAATACTATAACTATAGATAATGGAACTAAACAATTGAAGGTACGTAAATTCAGTGGTAATAATTCTATTTATCAA AGAATAGAAAGTTATAAATCTAAACATAATATTACTAATTTATCAGTAACTGAGTATTATTCTTCAAATTCTCAGAAAAT AACAAAAACTGTTTCAGATGTAAATAATATAACTGATGTATGGTATTATGTGGATAAAAATAACACTGTCTATGGTATTT CAACATCAGGTAATGTGCCTGGAACAGATGATGTTGTTAAACAGATAGTTGATAAATTATAA
Upstream 100 bases:
>100_bases TCTAGTGAATTTTTTAATAGATTTTTGTTTTTCTCTAATAAATTATAAGTATTATAAAATGCACATTAAACTATAATAAC TATTAAATGGAGGTAAAGTA
Downstream 100 bases:
>100_bases GTTATTTTTTTGATATATTTTTTCAAAAACATGATTATAATATAAAATAATACTTTTTTATTTTTTTTAATTTTCCAATA TATATTATCAAATATTAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKNNQVIILLILGIVALLGISIYAGIFSFSDNSTNNSTTFNITPPSGYSISNQTNNTITIDNGTKQLKVRKFSGNNSIYQ RIESYKSKHNITNLSVTEYYSSNSQKITKTVSDVNNITDVWYYVDKNNTVYGISTSGNVPGTDDVVKQIVDKL
Sequences:
>Translated_153_residues MKNNQVIILLILGIVALLGISIYAGIFSFSDNSTNNSTTFNITPPSGYSISNQTNNTITIDNGTKQLKVRKFSGNNSIYQ RIESYKSKHNITNLSVTEYYSSNSQKITKTVSDVNNITDVWYYVDKNNTVYGISTSGNVPGTDDVVKQIVDKL >Mature_153_residues MKNNQVIILLILGIVALLGISIYAGIFSFSDNSTNNSTTFNITPPSGYSISNQTNNTITIDNGTKQLKVRKFSGNNSIYQ RIESYKSKHNITNLSVTEYYSSNSQKITKTVSDVNNITDVWYYVDKNNTVYGISTSGNVPGTDDVVKQIVDKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16932; Mature: 16932
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNQVIILLILGIVALLGISIYAGIFSFSDNSTNNSTTFNITPPSGYSISNQTNNTITI CCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEECCCCCCEEEE DNGTKQLKVRKFSGNNSIYQRIESYKSKHNITNLSVTEYYSSNSQKITKTVSDVNNITDV CCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEE WYYVDKNNTVYGISTSGNVPGTDDVVKQIVDKL EEEECCCCEEEEEECCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MKNNQVIILLILGIVALLGISIYAGIFSFSDNSTNNSTTFNITPPSGYSISNQTNNTITI CCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEECCCCCCEEEE DNGTKQLKVRKFSGNNSIYQRIESYKSKHNITNLSVTEYYSSNSQKITKTVSDVNNITDV CCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEE WYYVDKNNTVYGISTSGNVPGTDDVVKQIVDKL EEEECCCCEEEEEECCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA