Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is wecC [H]
Identifier: 84489042
GI number: 84489042
Start: 265043
End: 266293
Strand: Direct
Name: wecC [H]
Synonym: Msp_0214
Alternate gene names: 84489042
Gene position: 265043-266293 (Clockwise)
Preceding gene: 84489041
Following gene: 84489043
Centisome position: 15.0
GC content: 28.54
Gene sequence:
>1251_bases ATGAAAATATGTGTTATAGGTCAAGGATATATAGGTATACCTACAGCAGCATTATTTGCATCCAATGGATGTGATGTGGT AGGTGTAGATATTAATGAAGAAATAATAAGTAATTTAAATAATGGAGTTATGACAATAGAAGAACCAAAAATTAATGAAA TTATGAATGCTTGTTTGGATAATGGAACATATCATGCAAGTTTAACTCCTGAAGAAGCTGATGTTTATATAATTACAGTT CCAACACCATTTAAAAAAGAAGATTTATCCTGTGATTTAGGTTTTGTAATATCAGCATGTAAATCAATATTACCACTTAT AAAAAAAGGAGATACTATCATAGTAGAATCAACAATAGCACCACTATCAACTGAAACAACAATAAAAGGTATCTTTGAAG ATAGGGGATTTAATGTTGGTGAAGACATATACTTAGCACATTGTCCAGAAAGAGTTCTACCAGGTAACATGGTTGATGAA TTAATACATAACAATAGAATAGTTGGTGGAATCAACAAAAGAAGTGCTAAAAAAGCTGCTGAAGTTTATAAAATATTTGT TAAAGGTGAAGTTATAGAAACTGAAGCAAAAGTTGCTGAATTATCTAAGTGTATGGAAAATACATATAGGGATGTGAATA TTGCACTAGCAAATGAATTAGCAAAGATTGGATCAAAACTAGGAATTAACATATTAGATGTTATTAAAATAGCAAATAAA CATCCTCGTGTAAATATACTTTCACCAGGGCCAGGAGTAGGTGGACATTGTCTTGCAATAGATCCATACTTCATATATTC ACTTATACCAGAGACTGCAAAAATCATAAAACTGGCTAGAGATACTAATAGAAGTATGCCAGATTTTGTTGTTGAAAATG TTAGAAAAATTCTAAAAAATGAAGATAATCCAATAATATCAGTATTTGGTGTGGCATATAAAGGAAATTCTGATGATGAT AGGGAAAGTCCATCTTATGAAATAATCAACAATCTTAAAGAAGATTATACTTTGAAAATATATGATCCTCATATAGAAAA AATAGATCTAAGCTTTGATGAAGCAATAAAAGATTCATCATTAATATTAGTACTTACAAATCATGATGAATTCATGCATA TGGACTTTGATAAAATAAAACAAGAAATGAAAAAGCCAGTAATATTTGATACAAGAAATATTATAGATAAACATTCAATT CCAGATGATATTATATTATATAACTTTGGAAATTTATATGATGTAGAATAG
Upstream 100 bases:
>100_bases TAATGATTATTTTTTTTATTTTAATATTATCAATTAATAATCATCTTGTTTGAATATGGATTTTAAAAATACCATTATCA ATAATAATAAAAGTGATATA
Downstream 100 bases:
>100_bases TGGTGACTTTTCAATGCATCCTTTTATTAGTGTAATTATACCTGTTTATAATGTTCAATTCACAATAGAAAGTTGTTTTC TATCTTTAAAAAATCAAACT
Product: UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Products: UDP-N-acetyl-D-mannosaminuronic-acid; NADH; Proton [C]
Alternate protein names: UDP-ManNAc 6-dehydrogenase [H]
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MKICVIGQGYIGIPTAALFASNGCDVVGVDINEEIISNLNNGVMTIEEPKINEIMNACLDNGTYHASLTPEEADVYIITV PTPFKKEDLSCDLGFVISACKSILPLIKKGDTIIVESTIAPLSTETTIKGIFEDRGFNVGEDIYLAHCPERVLPGNMVDE LIHNNRIVGGINKRSAKKAAEVYKIFVKGEVIETEAKVAELSKCMENTYRDVNIALANELAKIGSKLGINILDVIKIANK HPRVNILSPGPGVGGHCLAIDPYFIYSLIPETAKIIKLARDTNRSMPDFVVENVRKILKNEDNPIISVFGVAYKGNSDDD RESPSYEIINNLKEDYTLKIYDPHIEKIDLSFDEAIKDSSLILVLTNHDEFMHMDFDKIKQEMKKPVIFDTRNIIDKHSI PDDIILYNFGNLYDVE
Sequences:
>Translated_416_residues MKICVIGQGYIGIPTAALFASNGCDVVGVDINEEIISNLNNGVMTIEEPKINEIMNACLDNGTYHASLTPEEADVYIITV PTPFKKEDLSCDLGFVISACKSILPLIKKGDTIIVESTIAPLSTETTIKGIFEDRGFNVGEDIYLAHCPERVLPGNMVDE LIHNNRIVGGINKRSAKKAAEVYKIFVKGEVIETEAKVAELSKCMENTYRDVNIALANELAKIGSKLGINILDVIKIANK HPRVNILSPGPGVGGHCLAIDPYFIYSLIPETAKIIKLARDTNRSMPDFVVENVRKILKNEDNPIISVFGVAYKGNSDDD RESPSYEIINNLKEDYTLKIYDPHIEKIDLSFDEAIKDSSLILVLTNHDEFMHMDFDKIKQEMKKPVIFDTRNIIDKHSI PDDIILYNFGNLYDVE >Mature_416_residues MKICVIGQGYIGIPTAALFASNGCDVVGVDINEEIISNLNNGVMTIEEPKINEIMNACLDNGTYHASLTPEEADVYIITV PTPFKKEDLSCDLGFVISACKSILPLIKKGDTIIVESTIAPLSTETTIKGIFEDRGFNVGEDIYLAHCPERVLPGNMVDE LIHNNRIVGGINKRSAKKAAEVYKIFVKGEVIETEAKVAELSKCMENTYRDVNIALANELAKIGSKLGINILDVIKIANK HPRVNILSPGPGVGGHCLAIDPYFIYSLIPETAKIIKLARDTNRSMPDFVVENVRKILKNEDNPIISVFGVAYKGNSDDD RESPSYEIINNLKEDYTLKIYDPHIEKIDLSFDEAIKDSSLILVLTNHDEFMHMDFDKIKQEMKKPVIFDTRNIIDKHSI PDDIILYNFGNLYDVE
Specific function: Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA) [H]
COG id: COG0677
COG function: function code M; UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=444, Percent_Identity=26.3513513513513, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI296040438, Length=346, Percent_Identity=24.5664739884393, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI296040443, Length=431, Percent_Identity=23.6658932714617, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI48994968, Length=406, Percent_Identity=41.1330049261084, Blast_Score=320, Evalue=1e-88, Organism=Escherichia coli, GI1788340, Length=356, Percent_Identity=26.123595505618, Blast_Score=82, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17560350, Length=450, Percent_Identity=26.6666666666667, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI17136908, Length=452, Percent_Identity=25.6637168141593, Blast_Score=134, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: 1.1.1.- [C]
Molecular weight: Translated: 46278; Mature: 46278
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKICVIGQGYIGIPTAALFASNGCDVVGVDINEEIISNLNNGVMTIEEPKINEIMNACLD CEEEEEECCCCCCCHHHHEECCCCCEEEECCCHHHHHCCCCCEEEECCCCHHHHHHHHHC NGTYHASLTPEEADVYIITVPTPFKKEDLSCDLGFVISACKSILPLIKKGDTIIVESTIA CCEEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC PLSTETTIKGIFEDRGFNVGEDIYLAHCPERVLPGNMVDELIHNNRIVGGINKRSAKKAA CCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCEEEECCCHHHHHHHH EVYKIFVKGEVIETEAKVAELSKCMENTYRDVNIALANELAKIGSKLGINILDVIKIANK HHHEEEEECEEEEHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHCC HPRVNILSPGPGVGGHCLAIDPYFIYSLIPETAKIIKLARDTNRSMPDFVVENVRKILKN CCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC EDNPIISVFGVAYKGNSDDDRESPSYEIINNLKEDYTLKIYDPHIEKIDLSFDEAIKDSS CCCCEEEEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCEEECCCHHHHCCCCC LILVLTNHDEFMHMDFDKIKQEMKKPVIFDTRNIIDKHSIPDDIILYNFGNLYDVE EEEEEECCCCEEECCHHHHHHHHHCCEEEECHHHHHHCCCCCCEEEEECCCEEECC >Mature Secondary Structure MKICVIGQGYIGIPTAALFASNGCDVVGVDINEEIISNLNNGVMTIEEPKINEIMNACLD CEEEEEECCCCCCCHHHHEECCCCCEEEECCCHHHHHCCCCCEEEECCCCHHHHHHHHHC NGTYHASLTPEEADVYIITVPTPFKKEDLSCDLGFVISACKSILPLIKKGDTIIVESTIA CCEEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC PLSTETTIKGIFEDRGFNVGEDIYLAHCPERVLPGNMVDELIHNNRIVGGINKRSAKKAA CCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCEEEECCCHHHHHHHH EVYKIFVKGEVIETEAKVAELSKCMENTYRDVNIALANELAKIGSKLGINILDVIKIANK HHHEEEEECEEEEHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHCC HPRVNILSPGPGVGGHCLAIDPYFIYSLIPETAKIIKLARDTNRSMPDFVVENVRKILKN CCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC EDNPIISVFGVAYKGNSDDDRESPSYEIINNLKEDYTLKIYDPHIEKIDLSFDEAIKDSS CCCCEEEEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCEEECCCHHHHCCCCC LILVLTNHDEFMHMDFDKIKQEMKKPVIFDTRNIIDKHSIPDDIILYNFGNLYDVE EEEEEECCCCEEECCHHHHHHHHHCCEEEECHHHHHHCCCCCCEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-acetyl-D-mannosamine; NAD [C]
Specific reaction: UDP-N-acetyl-D-mannosamine + NAD = UDP-N-acetyl-D-mannosaminuronic-acid + NADH + Proton [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA