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The map label for this gene is sufB [H]

Identifier: 83721302

GI number: 83721302

Start: 2010145

End: 2011383

Strand: Reverse

Name: sufB [H]

Synonym: BTH_I1795

Alternate gene names: 83721302

Gene position: 2011383-2010145 (Counterclockwise)

Preceding gene: 83718973

Following gene: 83720072

Centisome position: 52.8

GC content: 71.43

Gene sequence:

>1239_bases
ATGACGACGACAGACACCGAACGGATCGCCGCGCGAGCGCAGCTCGCTGAACGCGGCTGGATCTCGCGGCACAACGAATC
GTTCCGCCATCTGCCCCCGCCCGCGGCCGACGCGTGGCTCGGCGGCGAAACCGGCCAAGCATGCGCGGACCGCATGCCGA
GCGCCGCCGCGCGCGCCGGCTGGCTGCTCGCGCCTGTCGGCTCCGGCTCGCTCGAACACATCGACGCATGCTGGCTCAGC
GCCGCGGATTGCGCCGAGCGCGCCGCGTTGTTCGCGGACTTGCCGACGTCGTCCGAAGACGACGCCGCCCCGTTTTTCTG
GGCGCATCGCGCGCTGTGCGAAGCGGGCTTGCGGCTGCGCATCGGCAGCGGCCCCGCGCATCGCGCGCCCGTGATGCTGC
AATTGCGGCTGCAATCGAACGCGAGCGTCGAAGCGCCGCTCGTCGTGATCGACGTGATGCCCGGCGCGCATTGCATGCTC
GTCGAATCGCACGAGCACGACGCCGGCGGCCGCGGCGGCCCGATCACGCAGAACCTGCACGCGTACGTGCGGCTTGGCGC
CGGCGCGACACTCGACCATCTGCGCGTCGCGACGCCCGGCGCGCGCGATCGGATCGCCCATCACGTGCACGTGCGGATCG
AGCACGATGCGCAATACCGGCAATCGCTGCTCGCGTCGGGCAGCGAGTACCACTTGCAACGCACGGTGCTCGATCTGCGC
GGCGAACGCGCACTGGGTCGCGCATCCGGCGCGCTGTTCGCGTCCGCTCACGCGAGGCTCGAGCAGCAGGTGCGCGCGAT
GCATGCGTCGCCGAATACGCAAAGCGCGATCGATGCGCTCGCCCTCGCGGGCGGCCACGCGCAGATCGTCGCGAACGCGT
TCTCGTCGATCGCCGCGGGCGCGTCGGGGGCCGATCTCCGGCAGCGCCTGAGCGGCATTCCGACAGGCGGCGAGCCGCGC
GTCGTATTGCGTCCGCACCTCGAGATCCACCACGACGACGTTCAGGCGGCGCACGGCGCGACTTGGGGGGCGTTGCCCGA
AGACGCGCTCTTCTATGCATGCCAGCGCGGCCTCGATCGCCGAGACGCACTGGCGATGATCGTCGCGGGCATGGCGCACG
CCGCGCTCGCGCGCGGCATCGACACGCCGGGCAGACTGGAGACGCTCGGCGGCGACGCGCTGCTCGCACGCGAAGTCGCC
CGGCATCTCGCCGAACAAGCGGAGGCGCATCATGGGTGA

Upstream 100 bases:

>100_bases
GACCGCGGACGCATCGCCGAATCCGGCGATCTCGCCCTCGCCCGCGACATCGCGGCGAAGGGCTTCGTTCGCACGGACGC
GCTCGCGGAGGCTTGACGCG

Downstream 100 bases:

>100_bases
CATGCTGCGTTCGACCACGATGGCGAGCGCCTTCCCGGCGCTCGCGCAGCGCGTGAACGGCGCGCCGCTCGCGTATCTCG
ACAACGCGGCGACGACGCAC

Product: SufD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MTTTDTERIAARAQLAERGWISRHNESFRHLPPPAADAWLGGETGQACADRMPSAAARAGWLLAPVGSGSLEHIDACWLS
AADCAERAALFADLPTSSEDDAAPFFWAHRALCEAGLRLRIGSGPAHRAPVMLQLRLQSNASVEAPLVVIDVMPGAHCML
VESHEHDAGGRGGPITQNLHAYVRLGAGATLDHLRVATPGARDRIAHHVHVRIEHDAQYRQSLLASGSEYHLQRTVLDLR
GERALGRASGALFASAHARLEQQVRAMHASPNTQSAIDALALAGGHAQIVANAFSSIAAGASGADLRQRLSGIPTGGEPR
VVLRPHLEIHHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAGMAHAALARGIDTPGRLETLGGDALLAREVA
RHLAEQAEAHHG

Sequences:

>Translated_412_residues
MTTTDTERIAARAQLAERGWISRHNESFRHLPPPAADAWLGGETGQACADRMPSAAARAGWLLAPVGSGSLEHIDACWLS
AADCAERAALFADLPTSSEDDAAPFFWAHRALCEAGLRLRIGSGPAHRAPVMLQLRLQSNASVEAPLVVIDVMPGAHCML
VESHEHDAGGRGGPITQNLHAYVRLGAGATLDHLRVATPGARDRIAHHVHVRIEHDAQYRQSLLASGSEYHLQRTVLDLR
GERALGRASGALFASAHARLEQQVRAMHASPNTQSAIDALALAGGHAQIVANAFSSIAAGASGADLRQRLSGIPTGGEPR
VVLRPHLEIHHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAGMAHAALARGIDTPGRLETLGGDALLAREVA
RHLAEQAEAHHG
>Mature_411_residues
TTTDTERIAARAQLAERGWISRHNESFRHLPPPAADAWLGGETGQACADRMPSAAARAGWLLAPVGSGSLEHIDACWLSA
ADCAERAALFADLPTSSEDDAAPFFWAHRALCEAGLRLRIGSGPAHRAPVMLQLRLQSNASVEAPLVVIDVMPGAHCMLV
ESHEHDAGGRGGPITQNLHAYVRLGAGATLDHLRVATPGARDRIAHHVHVRIEHDAQYRQSLLASGSEYHLQRTVLDLRG
ERALGRASGALFASAHARLEQQVRAMHASPNTQSAIDALALAGGHAQIVANAFSSIAAGASGADLRQRLSGIPTGGEPRV
VLRPHLEIHHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAGMAHAALARGIDTPGRLETLGGDALLAREVAR
HLAEQAEAHHG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=140, Percent_Identity=27.1428571428571, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 43690; Mature: 43558

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTDTERIAARAQLAERGWISRHNESFRHLPPPAADAWLGGETGQACADRMPSAAARAG
CCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHCC
WLLAPVGSGSLEHIDACWLSAADCAERAALFADLPTSSEDDAAPFFWAHRALCEAGLRLR
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCEEE
IGSGPAHRAPVMLQLRLQSNASVEAPLVVIDVMPGAHCMLVESHEHDAGGRGGPITQNLH
ECCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCE
AYVRLGAGATLDHLRVATPGARDRIAHHVHVRIEHDAQYRQSLLASGSEYHLQRTVLDLR
EEEEECCCCCHHHEEECCCCHHHHCCEEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHC
GERALGRASGALFASAHARLEQQVRAMHASPNTQSAIDALALAGGHAQIVANAFSSIAAG
CCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCC
ASGADLRQRLSGIPTGGEPRVVLRPHLEIHHDDVQAAHGATWGALPEDALFYACQRGLDR
CCCHHHHHHHCCCCCCCCCEEEEECCCEEECCHHHHHCCCCCCCCCHHHHHHHHHHCCCH
RDALAMIVAGMAHAALARGIDTPGRLETLGGDALLAREVARHLAEQAEAHHG
HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTTDTERIAARAQLAERGWISRHNESFRHLPPPAADAWLGGETGQACADRMPSAAARAG
CCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHCC
WLLAPVGSGSLEHIDACWLSAADCAERAALFADLPTSSEDDAAPFFWAHRALCEAGLRLR
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCEEE
IGSGPAHRAPVMLQLRLQSNASVEAPLVVIDVMPGAHCMLVESHEHDAGGRGGPITQNLH
ECCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCE
AYVRLGAGATLDHLRVATPGARDRIAHHVHVRIEHDAQYRQSLLASGSEYHLQRTVLDLR
EEEEECCCCCHHHEEECCCCHHHHCCEEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHC
GERALGRASGALFASAHARLEQQVRAMHASPNTQSAIDALALAGGHAQIVANAFSSIAAG
CCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCC
ASGADLRQRLSGIPTGGEPRVVLRPHLEIHHDDVQAAHGATWGALPEDALFYACQRGLDR
CCCHHHHHHHCCCCCCCCCEEEEECCCEEECCHHHHHCCCCCCCCCHHHHHHHHHHCCCH
RDALAMIVAGMAHAALARGIDTPGRLETLGGDALLAREVARHLAEQAEAHHG
HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 10322040 [H]