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The map label for this gene is sufC [H]

Identifier: 83718973

GI number: 83718973

Start: 2011388

End: 2012158

Strand: Reverse

Name: sufC [H]

Synonym: BTH_I1796

Alternate gene names: 83718973

Gene position: 2012158-2011388 (Counterclockwise)

Preceding gene: 83719110

Following gene: 83721302

Centisome position: 52.82

GC content: 69.26

Gene sequence:

>771_bases
ATGAATCGATCCGAACCCTTGCTGCAGGTATTCGACCTGAGCGTCGACGTCGCGAAGCGCCGCGTGCTGCAGTCGGTATC
GCTCACCGTGCCGGCAGGCGCGCTCGTCGTGCTGATGGGCGCGAACGGCAGCGGCAAGAGCACGCTCGGCATGACGCTCG
CGGGACATCCCGCCTATCGCGTGACGCACGGCCATGCGCGATTCGGCGGGCGGGACCTGCTCGCGATGAGCGTGCAGGAG
CGCGCGCGCGCCGGCCTGTTCCTGTCGTTCCAGGCGCCGCCCGACATCCCCGGCGTGAAGAACAGTCTCTTCATCCGCAC
CGCGCTCAATGCGGTGCGCGAGGCGCGCGGCGACACCGCGCTCGACGCGGTCGACTTTCTCGGCGACGCGCGCGCGTCCG
CCGCGCGCGTCGGGCTGCCGGACGCGATGCTCAACCGTTCGATGAACGAAGGTTTCTCGGGTGGCGAGCGCAAGCGCAAC
GAGCTGTTGCAGCTCGCGCTGCTGCGCCCGCGGCTCGCGATGCTCGACGAAATCGACTCGGGGATGGACGTCGACGGCGT
GCGCGCGGCGGTCGATCTGATCGGCCGGCTGCGCGAGCAAGGCACCGCGTTCGTGATCGTGTCGCATTACCTGCAGATGA
TCGAATCGCTCGCGCCCGATACGGTGTTGCTGCTCGACCGCGGACGCATCGCCGAATCCGGCGATCTCGCCCTCGCCCGC
GACATCGCGGCGAAGGGCTTCGTTCGCACGGACGCGCTCGCGGAGGCTTGA

Upstream 100 bases:

>100_bases
GCTGCCGATGGAATTCGCGCTCGAGGCCAAAGCGCTGCTCGCGGTGTCGCTCGAAGGCGCCGTCGGCTGATCCCCACACA
TGACGAACGAAGGAATCACC

Downstream 100 bases:

>100_bases
CGCGATGACGACGACAGACACCGAACGGATCGCCGCGCGAGCGCAGCTCGCTGAACGCGGCTGGATCTCGCGGCACAACG
AATCGTTCCGCCATCTGCCC

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MNRSEPLLQVFDLSVDVAKRRVLQSVSLTVPAGALVVLMGANGSGKSTLGMTLAGHPAYRVTHGHARFGGRDLLAMSVQE
RARAGLFLSFQAPPDIPGVKNSLFIRTALNAVREARGDTALDAVDFLGDARASAARVGLPDAMLNRSMNEGFSGGERKRN
ELLQLALLRPRLAMLDEIDSGMDVDGVRAAVDLIGRLREQGTAFVIVSHYLQMIESLAPDTVLLLDRGRIAESGDLALAR
DIAAKGFVRTDALAEA

Sequences:

>Translated_256_residues
MNRSEPLLQVFDLSVDVAKRRVLQSVSLTVPAGALVVLMGANGSGKSTLGMTLAGHPAYRVTHGHARFGGRDLLAMSVQE
RARAGLFLSFQAPPDIPGVKNSLFIRTALNAVREARGDTALDAVDFLGDARASAARVGLPDAMLNRSMNEGFSGGERKRN
ELLQLALLRPRLAMLDEIDSGMDVDGVRAAVDLIGRLREQGTAFVIVSHYLQMIESLAPDTVLLLDRGRIAESGDLALAR
DIAAKGFVRTDALAEA
>Mature_256_residues
MNRSEPLLQVFDLSVDVAKRRVLQSVSLTVPAGALVVLMGANGSGKSTLGMTLAGHPAYRVTHGHARFGGRDLLAMSVQE
RARAGLFLSFQAPPDIPGVKNSLFIRTALNAVREARGDTALDAVDFLGDARASAARVGLPDAMLNRSMNEGFSGGERKRN
ELLQLALLRPRLAMLDEIDSGMDVDGVRAAVDLIGRLREQGTAFVIVSHYLQMIESLAPDTVLLLDRGRIAESGDLALAR
DIAAKGFVRTDALAEA

Specific function: Has low ATPase activity. The SufBCD complex acts synergistically with SufE to stimulate the cysteine desulfurase activity of SufS. The SufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May f

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787972, Length=241, Percent_Identity=45.643153526971, Blast_Score=228, Evalue=3e-61,
Organism=Escherichia coli, GI1789962, Length=249, Percent_Identity=30.1204819277108, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI87081709, Length=235, Percent_Identity=29.7872340425532, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787029, Length=233, Percent_Identity=27.4678111587983, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1786654, Length=214, Percent_Identity=29.9065420560748, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1789891, Length=218, Percent_Identity=30.7339449541284, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI87081834, Length=207, Percent_Identity=30.9178743961353, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI48994997, Length=241, Percent_Identity=28.6307053941909, Blast_Score=61, Evalue=6e-11,
Organism=Escherichia coli, GI1789593, Length=218, Percent_Identity=28.4403669724771, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=217, Percent_Identity=25.8064516129032, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71992285, Length=218, Percent_Identity=28.4403669724771, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=225, Percent_Identity=28.8888888888889, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115535101, Length=217, Percent_Identity=29.9539170506912, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27342; Mature: 27342

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSEPLLQVFDLSVDVAKRRVLQSVSLTVPAGALVVLMGANGSGKSTLGMTLAGHPAYR
CCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEECCCCEE
VTHGHARFGGRDLLAMSVQERARAGLFLSFQAPPDIPGVKNSLFIRTALNAVREARGDTA
EECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHH
LDAVDFLGDARASAARVGLPDAMLNRSMNEGFSGGERKRNELLQLALLRPRLAMLDEIDS
HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GMDVDGVRAAVDLIGRLREQGTAFVIVSHYLQMIESLAPDTVLLLDRGRIAESGDLALAR
CCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHH
DIAAKGFVRTDALAEA
HHHHCCCHHHHHHHCC
>Mature Secondary Structure
MNRSEPLLQVFDLSVDVAKRRVLQSVSLTVPAGALVVLMGANGSGKSTLGMTLAGHPAYR
CCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEECCCCEE
VTHGHARFGGRDLLAMSVQERARAGLFLSFQAPPDIPGVKNSLFIRTALNAVREARGDTA
EECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHH
LDAVDFLGDARASAARVGLPDAMLNRSMNEGFSGGERKRNELLQLALLRPRLAMLDEIDS
HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GMDVDGVRAAVDLIGRLREQGTAFVIVSHYLQMIESLAPDTVLLLDRGRIAESGDLALAR
CCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHH
DIAAKGFVRTDALAEA
HHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 10322040 [H]