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The map label for this gene is cyaB [H]

Identifier: 83721169

GI number: 83721169

Start: 2004829

End: 2005962

Strand: Reverse

Name: cyaB [H]

Synonym: BTH_I1788

Alternate gene names: 83721169

Gene position: 2005962-2004829 (Counterclockwise)

Preceding gene: 83720448

Following gene: 83720215

Centisome position: 52.66

GC content: 62.87

Gene sequence:

>1134_bases
GTGTCCGGCGCGCCGGCGCTTCTTCTCCCGCGCCGCTTTCCGACGCGCGATTTCACCCCCGCATCGAGTTCGTCTGAACG
TAGATCAAGACCTCAACCCCATTGTTGTTTGCGAATCGTCAACATGCGCTCCGTGAAATTCCGCTACATTCCGCCGCCAA
AGCGACTGGATGTCGCATCGAGCGCGGCGAATGCGTTTCGGCGTCTCGGCAGGCCCGCTTCATCACAAACCCAGGCAAAT
TCAATGGTCCGAAGAATAACGAGTAGAGCGTCCGCGATCCTGCGATTAGGGCTCGTCGCGGGACTTTCCGGATGCAGCGA
GCTGCACGTGCTCGATCCGAAAGGCGCGATCGGCGCCGCGGAGAAGTCGCTGATCGCGACGTCGACGTGGGCGATGCTGA
TCGTCGTCGTGCCGGTGATTTTCCTCACGCTGCTGTTCGCGTGGCGCTACCGCGCATCGAACCGCAATGCGACCTATGCG
CCGAAGTGGGCGCACTCCACCGCGATCGAGATCGTGATCTGGACGGTGCCGTCGCTGATCATTCTGTTCCTCGGCATCCT
CACGTGGAAGACGACCCACGCGCTGGATCCGTACCGGCCGATCGAATCGTCGGTGAAGCCGATCGACGTCGAGGTCGTCG
CGCTCGACTGGAAGTGGCTGTTCGTCTATCCCGAGCTCGGCATTGCTTCGGTCAACCAACTGGCGGTGCCCGTCGGCACG
CCGATCAATTTCCGGATCACGTCCGATTCGGTGATGAACTCGTTCTTCATTCCGCAGCTCGGCACGCAGGTCTACGCGAT
GGCCGGCATGCAGACGCGGCTGCACCTGATCGCGGACGAGCCGGGCGACTTCGCCGGCATCTCGGCGAACTACAGCGGCC
GCGGCTTCTCGGACATGAAGTTCCGCACGCTCGCGACGTCGCGCGACGCCTTCGACGCGTGGGTCGCGAAAGTGCGCGCG
TCGGCCGACCGGCTCGACATGACCGCGTACAGCCAGCTCGCGCAGCCGAGCGAGAAGCAGCCGGTGCGCTACTACTCGAC
GGTCGACTCGCGGCTCTTTCACAACATCATCGCGAAGTACAACAACGGTCACGTCCTCGATCTGACGGACGCCGCCTGTC
GGACGAAGAGGTAA

Upstream 100 bases:

>100_bases
CCGCCTTCTCGAAGGTACATGCCGCGCCCACCGTTCGCTCGTCGATCTGCGTTCCCGTTGATTCAGCACAAGATCGCCGC
GCCGCACGCGCGCTCGCAGC

Downstream 100 bases:

>100_bases
TGCATGTTCGGTAAATTGACGCTTTCGGCGATCCCGTTCGATCAGCCGATCATCATGGGCGCGGCCGCGCTCATGGCGCT
CGTCGCGCTGTCTGTCGTCG

Product: ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome A1 subunit 2; Oxidase BA(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSGAPALLLPRRFPTRDFTPASSSSERRSRPQPHCCLRIVNMRSVKFRYIPPPKRLDVASSAANAFRRLGRPASSQTQAN
SMVRRITSRASAILRLGLVAGLSGCSELHVLDPKGAIGAAEKSLIATSTWAMLIVVVPVIFLTLLFAWRYRASNRNATYA
PKWAHSTAIEIVIWTVPSLIILFLGILTWKTTHALDPYRPIESSVKPIDVEVVALDWKWLFVYPELGIASVNQLAVPVGT
PINFRITSDSVMNSFFIPQLGTQVYAMAGMQTRLHLIADEPGDFAGISANYSGRGFSDMKFRTLATSRDAFDAWVAKVRA
SADRLDMTAYSQLAQPSEKQPVRYYSTVDSRLFHNIIAKYNNGHVLDLTDAACRTKR

Sequences:

>Translated_377_residues
MSGAPALLLPRRFPTRDFTPASSSSERRSRPQPHCCLRIVNMRSVKFRYIPPPKRLDVASSAANAFRRLGRPASSQTQAN
SMVRRITSRASAILRLGLVAGLSGCSELHVLDPKGAIGAAEKSLIATSTWAMLIVVVPVIFLTLLFAWRYRASNRNATYA
PKWAHSTAIEIVIWTVPSLIILFLGILTWKTTHALDPYRPIESSVKPIDVEVVALDWKWLFVYPELGIASVNQLAVPVGT
PINFRITSDSVMNSFFIPQLGTQVYAMAGMQTRLHLIADEPGDFAGISANYSGRGFSDMKFRTLATSRDAFDAWVAKVRA
SADRLDMTAYSQLAQPSEKQPVRYYSTVDSRLFHNIIAKYNNGHVLDLTDAACRTKR
>Mature_376_residues
SGAPALLLPRRFPTRDFTPASSSSERRSRPQPHCCLRIVNMRSVKFRYIPPPKRLDVASSAANAFRRLGRPASSQTQANS
MVRRITSRASAILRLGLVAGLSGCSELHVLDPKGAIGAAEKSLIATSTWAMLIVVVPVIFLTLLFAWRYRASNRNATYAP
KWAHSTAIEIVIWTVPSLIILFLGILTWKTTHALDPYRPIESSVKPIDVEVVALDWKWLFVYPELGIASVNQLAVPVGTP
INFRITSDSVMNSFFIPQLGTQVYAMAGMQTRLHLIADEPGDFAGISANYSGRGFSDMKFRTLATSRDAFDAWVAKVRAS
ADRLDMTAYSQLAQPSEKQPVRYYSTVDSRLFHNIIAKYNNGHVLDLTDAACRTKR

Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=281, Percent_Identity=56.9395017793594, Blast_Score=335, Evalue=3e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 41815; Mature: 41684

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGAPALLLPRRFPTRDFTPASSSSERRSRPQPHCCLRIVNMRSVKFRYIPPPKRLDVAS
CCCCCCEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHEEECCCCEEEEECCCCCHHHHHH
SAANAFRRLGRPASSQTQANSMVRRITSRASAILRLGLVAGLSGCSELHVLDPKGAIGAA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
EKSLIATSTWAMLIVVVPVIFLTLLFAWRYRASNRNATYAPKWAHSTAIEIVIWTVPSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHH
ILFLGILTWKTTHALDPYRPIESSVKPIDVEVVALDWKWLFVYPELGIASVNQLAVPVGT
HHHHHHHHHHHHCCCCCCCCHHCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCEEEECCC
PINFRITSDSVMNSFFIPQLGTQVYAMAGMQTRLHLIADEPGDFAGISANYSGRGFSDMK
CEEEEECCHHHHHHHCCHHHCCHHHHHHCCCEEEEEEECCCCCCCEEECCCCCCCCCCCE
FRTLATSRDAFDAWVAKVRASADRLDMTAYSQLAQPSEKQPVRYYSTVDSRLFHNIIAKY
EEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
NNGHVLDLTDAACRTKR
CCCCEEEECHHHHCCCC
>Mature Secondary Structure 
SGAPALLLPRRFPTRDFTPASSSSERRSRPQPHCCLRIVNMRSVKFRYIPPPKRLDVAS
CCCCCEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHEEECCCCEEEEECCCCCHHHHHH
SAANAFRRLGRPASSQTQANSMVRRITSRASAILRLGLVAGLSGCSELHVLDPKGAIGAA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
EKSLIATSTWAMLIVVVPVIFLTLLFAWRYRASNRNATYAPKWAHSTAIEIVIWTVPSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHH
ILFLGILTWKTTHALDPYRPIESSVKPIDVEVVALDWKWLFVYPELGIASVNQLAVPVGT
HHHHHHHHHHHHCCCCCCCCHHCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCEEEECCC
PINFRITSDSVMNSFFIPQLGTQVYAMAGMQTRLHLIADEPGDFAGISANYSGRGFSDMK
CEEEEECCHHHHHHHCCHHHCCHHHHHHCCCEEEEEEECCCCCCCEEECCCCCCCCCCCE
FRTLATSRDAFDAWVAKVRASADRLDMTAYSQLAQPSEKQPVRYYSTVDSRLFHNIIAKY
EEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
NNGHVLDLTDAACRTKR
CCCCEEEECHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8392509 [H]