| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is nsrR [H]
Identifier: 83720448
GI number: 83720448
Start: 2006680
End: 2007174
Strand: Reverse
Name: nsrR [H]
Synonym: BTH_I1790
Alternate gene names: 83720448
Gene position: 2007174-2006680 (Counterclockwise)
Preceding gene: 83719359
Following gene: 83721169
Centisome position: 52.69
GC content: 65.86
Gene sequence:
>495_bases TTGCCACGTATGCGACTCTCTGAATATACGGACTACACGCTGCGCGTGCTGATGTACTGCGCGTCGAATCCGGACCGGCT CATCACGATCGCGGAGCTCGCCGAGCGCCACGACGTGTCGAAGAATCATCTGACGAAGATCGTCAACAGCCTCGCGCGCC AGGGCACGCTGGAGACGACGCGCGGTCGCGGTGGCGGCGTGCGTCTCGCGCTGCCGCCCGAGCGCATCGGCATCGGCGAC GTGATTCGCTCGTCCGAAACGGATTTCCGTCTCGTCGAGTGCTTCGACCGGAACACGAACACGTGCATGCTCGCCGCGAA GTGCCGGCTCGAGCGGCTGCTCGACAGCGCACTGCGTGCGTACTTCAAGGAGCTCGACGGCGCGACGCTCGCGGATCTCG TCGGCCCGCCGCCGAAGAACGGATTGAGCGCGGCCGAAAGGACGCACGAATTCGCGGTCGCGATGCCGTCGAAGTCGATC GCGCGCGCGCGATGA
Upstream 100 bases:
>100_bases TCACCCGGCTTGCAACATGCAGCCGTTAACTATATAAAGTGCATGTATTGCGCATGTTATAGCGCACCACCCTCAATAGC AACACAATACATGCATCTTT
Downstream 100 bases:
>100_bases CGGTCGAGCCCCAATGCTGATCGCCGCCGCGCGCGCGTCGCGCGCGAACGCGGCGGCCGAACGTCGCGCCGCACATTCGG CCGTGCTCGCTTTGCTTCGG
Product: Rrf2 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MPRMRLSEYTDYTLRVLMYCASNPDRLITIAELAERHDVSKNHLTKIVNSLARQGTLETTRGRGGGVRLALPPERIGIGD VIRSSETDFRLVECFDRNTNTCMLAAKCRLERLLDSALRAYFKELDGATLADLVGPPPKNGLSAAERTHEFAVAMPSKSI ARAR
Sequences:
>Translated_164_residues MPRMRLSEYTDYTLRVLMYCASNPDRLITIAELAERHDVSKNHLTKIVNSLARQGTLETTRGRGGGVRLALPPERIGIGD VIRSSETDFRLVECFDRNTNTCMLAAKCRLERLLDSALRAYFKELDGATLADLVGPPPKNGLSAAERTHEFAVAMPSKSI ARAR >Mature_163_residues PRMRLSEYTDYTLRVLMYCASNPDRLITIAELAERHDVSKNHLTKIVNSLARQGTLETTRGRGGGVRLALPPERIGIGDV IRSSETDFRLVECFDRNTNTCMLAAKCRLERLLDSALRAYFKELDGATLADLVGPPPKNGLSAAERTHEFAVAMPSKSIA RAR
Specific function: Nitric oxide-responsive transcriptional regulator [H]
COG id: COG1959
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790621, Length=132, Percent_Identity=43.1818181818182, Blast_Score=111, Evalue=3e-26,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000944 - InterPro: IPR011991 [H]
Pfam domain/function: PF02082 Rrf2 [H]
EC number: NA
Molecular weight: Translated: 18233; Mature: 18102
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRMRLSEYTDYTLRVLMYCASNPDRLITIAELAERHDVSKNHLTKIVNSLARQGTLETT CCCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC RGRGGGVRLALPPERIGIGDVIRSSETDFRLVECFDRNTNTCMLAAKCRLERLLDSALRA CCCCCCEEEECCHHHCCHHHHHHCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH YFKELDGATLADLVGPPPKNGLSAAERTHEFAVAMPSKSIARAR HHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHEEECCCHHHHCCC >Mature Secondary Structure PRMRLSEYTDYTLRVLMYCASNPDRLITIAELAERHDVSKNHLTKIVNSLARQGTLETT CCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC RGRGGGVRLALPPERIGIGDVIRSSETDFRLVECFDRNTNTCMLAAKCRLERLLDSALRA CCCCCCEEEECCHHHCCHHHHHHCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH YFKELDGATLADLVGPPPKNGLSAAERTHEFAVAMPSKSIARAR HHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHEEECCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA