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The map label for this gene is yrdA [C]

Identifier: 83721024

GI number: 83721024

Start: 2145925

End: 2146449

Strand: Reverse

Name: yrdA [C]

Synonym: BTH_I1898

Alternate gene names: 83721024

Gene position: 2146449-2145925 (Counterclockwise)

Preceding gene: 83720287

Following gene: 83720059

Centisome position: 56.35

GC content: 65.14

Gene sequence:

>525_bases
GTGACCATCTACAAGCTCGGCGACAACGCCCCGTCCATCCACGAAAGCGTGTTTGTCGCGGACAGCGCGACGATCATCGG
CCAAGTCGTGCTGGAAGAGAACGCGAGCGTCTGGTTCGGCGCGACGATCCGTGGCGACAACGAGCCGATCACGGTCGGTG
CGGGCAGCAACGTGCAGGAAGGCGCGGTGCTGCACACCGATCCGGGATGCCCGCTCACGATCGCGCCGAACGTGACGGTC
GGCCATCAGGCGATGCTGCACGGCTGCACGATCGGCGAGGGCTCGCTGATCGGCATTCAGGCGGTGATCTTGAATCGCGC
GGTGATCGGCCGCAACTGCCTGGTCGGCGCGGGCGCGGTGATCACCGAGGGCAAGACGTTTCCCGACAATTCGCTGATTC
TCGGCGCGCCGGCGAAGGTCGTGCGTACGCTGTCCGACGAGGACATCGCGCGGATGCACATGAACACGAAGAGCTACGCG
ATGCGGCGCGCGTATTTCAAGGAGCAGCTCGTGCGGATCGGCTGA

Upstream 100 bases:

>100_bases
ACAACCGTTTACAATAAGCGATTCGATCGCGCCGCATTCAAGCGCGACGCAACCGCGCGCCATTGTACCGGCCGCCCAGA
CAAGCCCCAAGGGAGACATC

Downstream 100 bases:

>100_bases
ACCGCCGCGCACGAGCCGTTTGATCGTCGAGGAAAAAAGTGAGCGACCAGTTACAGAAATTCATGTTCAACGCGGCCCCG
GTGCGCGGCGAGATCGTCTC

Product: hexapeptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTIYKLGDNAPSIHESVFVADSATIIGQVVLEENASVWFGATIRGDNEPITVGAGSNVQEGAVLHTDPGCPLTIAPNVTV
GHQAMLHGCTIGEGSLIGIQAVILNRAVIGRNCLVGAGAVITEGKTFPDNSLILGAPAKVVRTLSDEDIARMHMNTKSYA
MRRAYFKEQLVRIG

Sequences:

>Translated_174_residues
MTIYKLGDNAPSIHESVFVADSATIIGQVVLEENASVWFGATIRGDNEPITVGAGSNVQEGAVLHTDPGCPLTIAPNVTV
GHQAMLHGCTIGEGSLIGIQAVILNRAVIGRNCLVGAGAVITEGKTFPDNSLILGAPAKVVRTLSDEDIARMHMNTKSYA
MRRAYFKEQLVRIG
>Mature_173_residues
TIYKLGDNAPSIHESVFVADSATIIGQVVLEENASVWFGATIRGDNEPITVGAGSNVQEGAVLHTDPGCPLTIAPNVTVG
HQAMLHGCTIGEGSLIGIQAVILNRAVIGRNCLVGAGAVITEGKTFPDNSLILGAPAKVVRTLSDEDIARMHMNTKSYAM
RRAYFKEQLVRIG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=169, Percent_Identity=36.6863905325444, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1787667, Length=173, Percent_Identity=35.8381502890173, Blast_Score=115, Evalue=1e-27,
Organism=Escherichia coli, GI87081681, Length=161, Percent_Identity=36.0248447204969, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18353; Mature: 18222

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIYKLGDNAPSIHESVFVADSATIIGQVVLEENASVWFGATIRGDNEPITVGAGSNVQE
CEEEEECCCCCCCHHEEEEECCCCEEEEEEEECCCCEEEEEEEECCCCEEEEECCCCCCC
GAVLHTDPGCPLTIAPNVTVGHQAMLHGCTIGEGSLIGIQAVILNRAVIGRNCLVGAGAV
CEEEECCCCCCEEECCCCCCCCHHHEEECCCCCCCEEEHHEEEHHHHHHCCCEEEECCEE
ITEGKTFPDNSLILGAPAKVVRTLSDEDIARMHMNTKSYAMRRAYFKEQLVRIG
EECCCCCCCCCEEEECCHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIYKLGDNAPSIHESVFVADSATIIGQVVLEENASVWFGATIRGDNEPITVGAGSNVQE
EEEEECCCCCCCHHEEEEECCCCEEEEEEEECCCCEEEEEEEECCCCEEEEECCCCCCC
GAVLHTDPGCPLTIAPNVTVGHQAMLHGCTIGEGSLIGIQAVILNRAVIGRNCLVGAGAV
CEEEECCCCCCEEECCCCCCCCHHHEEECCCCCCCEEEHHEEEHHHHHHCCCEEEECCEE
ITEGKTFPDNSLILGAPAKVVRTLSDEDIARMHMNTKSYAMRRAYFKEQLVRIG
EECCCCCCCCCEEEECCHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]