| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is hslO [H]
Identifier: 83720059
GI number: 83720059
Start: 2144936
End: 2145886
Strand: Reverse
Name: hslO [H]
Synonym: BTH_I1897
Alternate gene names: 83720059
Gene position: 2145886-2144936 (Counterclockwise)
Preceding gene: 83721024
Following gene: 83719538
Centisome position: 56.33
GC content: 67.19
Gene sequence:
>951_bases GTGAGCGACCAGTTACAGAAATTCATGTTCAACGCGGCCCCGGTGCGCGGCGAGATCGTCTCGCTGCGCAACACGTGGCA AGAGGTGCTCACGCGCCGCGACTACCCGACGCCCGTGCGCAACGTGCTCGGCGAGATGATGGCGGCGTGCGCGCTGTTGT CGGCGAATCTGAAGTTCGACGGCACGCTCATCATGCAGATCTTCGGCGACGGCCCGGTGAAGATGCTCGTCGTCCAGTGC AGTGCGGACCTCGCGATGCGCGCGACCGCGAAGTTCTCGGGCGACGCCGCGCAGATCATCGGCGACGGCACGTCGTTCGC GAACCTGATCAACGCGAGCGGCCACGGCCGCTGCGTGATCACGCTCGACCCCGCCGACAAGCGGCCCGGCCAGCAGCCGT ATCAGGGCATCGTGCCGCTGAACGGCGAGGACGGCCCGCTCGCGTCGATCGCCGACGTGCTCGAGCATTACATGCGGCAC TCGGAGCAGCTCGACACGCGCCTCTGGCTCGCCGCCGATCAGGATCGCGCGGTCGGCGTGCTGCTGCAGAAGCTGCCGGG CGACGGCGGCATCGTGCCGCGCGTCGAGGAAACCGATACGGACACCTGGGAGCGCGTGTGCACGCTCGGCGGCACGCTTT CGTCGAAAGAGCTGCTCGAAGTGGAACCCGAGACCGTGTTTCGGCGTCTGTTCTGGCAGGAGAATGTGCAGCACTTCGAA CCGACGGCCACGCGCTTCCAGTGCACGTGCTCGCGCGAGAAGGTCGGCGGGATGCTGCGCATGCTCGGGCGCGTCGAGAT CGACGGCGTGATCGAAGAGCGCGGCCACGTCGAGATTCACTGCGAATTCTGCAATCAGCGCTACGAATTCGATCCGGTCG ACGTCGTCCAGTTGTTCGCGACGCCCGAACTCGGCGCGGGCGTCGCGCCCGCCGCCGCGCAACGGCACTGA
Upstream 100 bases:
>100_bases ACACGAAGAGCTACGCGATGCGGCGCGCGTATTTCAAGGAGCAGCTCGTGCGGATCGGCTGAACCGCCGCGCACGAGCCG TTTGATCGTCGAGGAAAAAA
Downstream 100 bases:
>100_bases TTCGCCCGCGAGCCAACGAGCAACCGGGCAATGCGCCGCGCCCGTTGTCCGGCGAGCGCGGCGCCGGCACAAGCCAGGAG GCAGCAGCATGAAATCGATT
Product: 33 kDa. chaperonin
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSDQLQKFMFNAAPVRGEIVSLRNTWQEVLTRRDYPTPVRNVLGEMMAACALLSANLKFDGTLIMQIFGDGPVKMLVVQC SADLAMRATAKFSGDAAQIIGDGTSFANLINASGHGRCVITLDPADKRPGQQPYQGIVPLNGEDGPLASIADVLEHYMRH SEQLDTRLWLAADQDRAVGVLLQKLPGDGGIVPRVEETDTDTWERVCTLGGTLSSKELLEVEPETVFRRLFWQENVQHFE PTATRFQCTCSREKVGGMLRMLGRVEIDGVIEERGHVEIHCEFCNQRYEFDPVDVVQLFATPELGAGVAPAAAQRH
Sequences:
>Translated_316_residues MSDQLQKFMFNAAPVRGEIVSLRNTWQEVLTRRDYPTPVRNVLGEMMAACALLSANLKFDGTLIMQIFGDGPVKMLVVQC SADLAMRATAKFSGDAAQIIGDGTSFANLINASGHGRCVITLDPADKRPGQQPYQGIVPLNGEDGPLASIADVLEHYMRH SEQLDTRLWLAADQDRAVGVLLQKLPGDGGIVPRVEETDTDTWERVCTLGGTLSSKELLEVEPETVFRRLFWQENVQHFE PTATRFQCTCSREKVGGMLRMLGRVEIDGVIEERGHVEIHCEFCNQRYEFDPVDVVQLFATPELGAGVAPAAAQRH >Mature_315_residues SDQLQKFMFNAAPVRGEIVSLRNTWQEVLTRRDYPTPVRNVLGEMMAACALLSANLKFDGTLIMQIFGDGPVKMLVVQCS ADLAMRATAKFSGDAAQIIGDGTSFANLINASGHGRCVITLDPADKRPGQQPYQGIVPLNGEDGPLASIADVLEHYMRHS EQLDTRLWLAADQDRAVGVLLQKLPGDGGIVPRVEETDTDTWERVCTLGGTLSSKELLEVEPETVFRRLFWQENVQHFEP TATRFQCTCSREKVGGMLRMLGRVEIDGVIEERGHVEIHCEFCNQRYEFDPVDVVQLFATPELGAGVAPAAAQRH
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=318, Percent_Identity=34.5911949685535, Blast_Score=194, Evalue=5e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - InterPro: IPR023212 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 34913; Mature: 34782
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQLQKFMFNAAPVRGEIVSLRNTWQEVLTRRDYPTPVRNVLGEMMAACALLSANLKFD CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC GTLIMQIFGDGPVKMLVVQCSADLAMRATAKFSGDAAQIIGDGTSFANLINASGHGRCVI CEEEEEEECCCCEEEEEEEECCCHHHHHHHCCCCCHHHEEECCHHHHHHHCCCCCCEEEE TLDPADKRPGQQPYQGIVPLNGEDGPLASIADVLEHYMRHSEQLDTRLWLAADQDRAVGV EECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHH LLQKLPGDGGIVPRVEETDTDTWERVCTLGGTLSSKELLEVEPETVFRRLFWQENVQHFE HHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHEECCHHHHHHHHHHHHHHHHCC PTATRFQCTCSREKVGGMLRMLGRVEIDGVIEERGHVEIHCEFCNQRYEFDPVDVVQLFA CCCCEEEEEECHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEECCCCCCCCHHHHHHHHC TPELGAGVAPAAAQRH CCCCCCCCCCCCCCCC >Mature Secondary Structure SDQLQKFMFNAAPVRGEIVSLRNTWQEVLTRRDYPTPVRNVLGEMMAACALLSANLKFD CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC GTLIMQIFGDGPVKMLVVQCSADLAMRATAKFSGDAAQIIGDGTSFANLINASGHGRCVI CEEEEEEECCCCEEEEEEEECCCHHHHHHHCCCCCHHHEEECCHHHHHHHCCCCCCEEEE TLDPADKRPGQQPYQGIVPLNGEDGPLASIADVLEHYMRHSEQLDTRLWLAADQDRAVGV EECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHH LLQKLPGDGGIVPRVEETDTDTWERVCTLGGTLSSKELLEVEPETVFRRLFWQENVQHFE HHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHEECCHHHHHHHHHHHHHHHHCC PTATRFQCTCSREKVGGMLRMLGRVEIDGVIEERGHVEIHCEFCNQRYEFDPVDVVQLFA CCCCEEEEEECHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEECCCCCCCCHHHHHHHHC TPELGAGVAPAAAQRH CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782 [H]