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The map label for this gene is yfjD [H]

Identifier: 82703251

GI number: 82703251

Start: 2425775

End: 2427073

Strand: Reverse

Name: yfjD [H]

Synonym: Nmul_A2132

Alternate gene names: 82703251

Gene position: 2427073-2425775 (Counterclockwise)

Preceding gene: 82703252

Following gene: 82703250

Centisome position: 76.22

GC content: 53.04

Gene sequence:

>1299_bases
ATGCCGTGGTATGTGCTGCTCGCAGCACTGGCTGTTCTGTTGATTTTATCCGCTTTTTTTTCCCTTTCCGAAACCAGCAT
GATGGCAATCAACCGTTACCGGTTGAAGCATCTTGCAAAAGAAGGCCATCGCGGCGCCCGCCTCACCAGTCAGTTGCTGC
TGAATACCGACCGTCTTCTAGGGGTGATTCTCCTTGGCAACAACTTGCTGAATGCGGCCGCAGCCACACTGGTTGCAGTG
ATTGTGTCCATTTTCTTCGGGCACAGCGATGCGGCTCTTTTTATTGGAACGGTAGGGGTGACCTTCGCTATCCTGGTATT
CAGTGAAATCACTCCGAAAGTTGTCGCCGCGGCCTATCCCGAGCGTATCGCCCTGGCGTCAAGCTATGTGTTGACGCCAC
TACTGAAAGTCTTCTCGCCTGTGGTATGGTTCATCAACCTGTTTGTGAAGGCGCTGCTTATCCTTCTGCGCCTGAAACCG
CAGAACGAGGATCTGACTCAGAAAATCAGCCTTGAGGAACTCAAAACACTCGTGCTGGAAGCAGGCCACTTCATCCGGCA
AAAACACCAGAGCATGCTGCTCAACCTGTTCGATCTCGAGAATGTCACGGTCGACGACGTCATGGTGCCGCGCGGCCAGA
TCGAGGCAATAGACCTAGAAGACGACGATGAGAGCATCCGGGATCAACTGCTGACTTGTTATCACACGCGCCTGCCGGTA
TACCGTGGTGCGATGGATAACGTTACCGGAATAATTCATGTGCGCAAGGTGCTCAACCAGATGAGAAGCGAGAACATCAC
GGCTGTAACGCTGGAGAAAATCATGCGCGAGCCTTACTTCATTCCCTCCGGAACACCCCTGTTTTCGCAACTGCAATTAT
TCCAGGAAAACCGCGAGCGCGTCGGCCTGATCGTGGACGAGTATGGAGAATGGATGGGTCTGGTGACACTGGAGGATATT
GTCGAAGAAATCATCGGAGAATTCACCACTCATGCGCCTTCGCAGGCCGGTAATTTCCTGAAGCAGGAAGACGGGAGTGT
AATCGTGGAAGGCAGCAATCTGTTGCGCGATCTCAACCGCAAGCTTGGCTGGAATCTGCCTCTGGGCGGACCCAAGACAT
TGAATGGGCTCATTCTCGAATACTTCCAGGACATTCCTGAGGCCGGGACCAGCGTGAAGATTGCAGGTTATCCCATGGAA
ATCATCCAGACCCAGGACCGTGTGGTAAAAGTGGTGCGGATCTTTCCTCCGTTAGCGCCAATCGAGGAGAAACTCCCAGA
CTCCTATGCGGAATCCTGA

Upstream 100 bases:

>100_bases
AAAAAGTGCAAGGAAATCCGGGGATGGAATCTCCAGTTATTCTGCCTTCTTTCCGCCCTGAATTTTTGTCTACTTGCAGA
AAGGCCTTCTCTTGGAAGAC

Downstream 100 bases:

>100_bases
TCCCCGGGGATGTCTTTTAAATGTCTTTTATCTCCGTGCTGCAATACTCTCCGGTGTTCTTTGCCTCGTTCTGCGCGCTC
ATTGGTCTGGTCGCCGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MPWYVLLAALAVLLILSAFFSLSETSMMAINRYRLKHLAKEGHRGARLTSQLLLNTDRLLGVILLGNNLLNAAAATLVAV
IVSIFFGHSDAALFIGTVGVTFAILVFSEITPKVVAAAYPERIALASSYVLTPLLKVFSPVVWFINLFVKALLILLRLKP
QNEDLTQKISLEELKTLVLEAGHFIRQKHQSMLLNLFDLENVTVDDVMVPRGQIEAIDLEDDDESIRDQLLTCYHTRLPV
YRGAMDNVTGIIHVRKVLNQMRSENITAVTLEKIMREPYFIPSGTPLFSQLQLFQENRERVGLIVDEYGEWMGLVTLEDI
VEEIIGEFTTHAPSQAGNFLKQEDGSVIVEGSNLLRDLNRKLGWNLPLGGPKTLNGLILEYFQDIPEAGTSVKIAGYPME
IIQTQDRVVKVVRIFPPLAPIEEKLPDSYAES

Sequences:

>Translated_432_residues
MPWYVLLAALAVLLILSAFFSLSETSMMAINRYRLKHLAKEGHRGARLTSQLLLNTDRLLGVILLGNNLLNAAAATLVAV
IVSIFFGHSDAALFIGTVGVTFAILVFSEITPKVVAAAYPERIALASSYVLTPLLKVFSPVVWFINLFVKALLILLRLKP
QNEDLTQKISLEELKTLVLEAGHFIRQKHQSMLLNLFDLENVTVDDVMVPRGQIEAIDLEDDDESIRDQLLTCYHTRLPV
YRGAMDNVTGIIHVRKVLNQMRSENITAVTLEKIMREPYFIPSGTPLFSQLQLFQENRERVGLIVDEYGEWMGLVTLEDI
VEEIIGEFTTHAPSQAGNFLKQEDGSVIVEGSNLLRDLNRKLGWNLPLGGPKTLNGLILEYFQDIPEAGTSVKIAGYPME
IIQTQDRVVKVVRIFPPLAPIEEKLPDSYAES
>Mature_431_residues
PWYVLLAALAVLLILSAFFSLSETSMMAINRYRLKHLAKEGHRGARLTSQLLLNTDRLLGVILLGNNLLNAAAATLVAVI
VSIFFGHSDAALFIGTVGVTFAILVFSEITPKVVAAAYPERIALASSYVLTPLLKVFSPVVWFINLFVKALLILLRLKPQ
NEDLTQKISLEELKTLVLEAGHFIRQKHQSMLLNLFDLENVTVDDVMVPRGQIEAIDLEDDDESIRDQLLTCYHTRLPVY
RGAMDNVTGIIHVRKVLNQMRSENITAVTLEKIMREPYFIPSGTPLFSQLQLFQENRERVGLIVDEYGEWMGLVTLEDIV
EEIIGEFTTHAPSQAGNFLKQEDGSVIVEGSNLLRDLNRKLGWNLPLGGPKTLNGLILEYFQDIPEAGTSVKIAGYPMEI
IQTQDRVVKVVRIFPPLAPIEEKLPDSYAES

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=372, Percent_Identity=26.0752688172043, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI40068055, Length=339, Percent_Identity=23.0088495575221, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI40068053, Length=339, Percent_Identity=23.0088495575221, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI145693175, Length=412, Percent_Identity=42.4757281553398, Blast_Score=345, Evalue=5e-96,
Organism=Escherichia coli, GI1790664, Length=439, Percent_Identity=26.1958997722096, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI87082033, Length=236, Percent_Identity=32.2033898305085, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1786879, Length=270, Percent_Identity=25.5555555555556, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1788119, Length=230, Percent_Identity=25.6521739130435, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 48277; Mature: 48146

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWYVLLAALAVLLILSAFFSLSETSMMAINRYRLKHLAKEGHRGARLTSQLLLNTDRLL
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GVILLGNNLLNAAAATLVAVIVSIFFGHSDAALFIGTVGVTFAILVFSEITPKVVAAAYP
EEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCH
ERIALASSYVLTPLLKVFSPVVWFINLFVKALLILLRLKPQNEDLTQKISLEELKTLVLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHH
AGHFIRQKHQSMLLNLFDLENVTVDDVMVPRGQIEAIDLEDDDESIRDQLLTCYHTRLPV
HHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCH
YRGAMDNVTGIIHVRKVLNQMRSENITAVTLEKIMREPYFIPSGTPLFSQLQLFQENRER
HHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCHHH
VGLIVDEYGEWMGLVTLEDIVEEIIGEFTTHAPSQAGNFLKQEDGSVIVEGSNLLRDLNR
HCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCEEEECHHHHHHHHH
KLGWNLPLGGPKTLNGLILEYFQDIPEAGTSVKIAGYPMEIIQTQDRVVKVVRIFPPLAP
HCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
IEEKLPDSYAES
HHHHCCCHHCCC
>Mature Secondary Structure 
PWYVLLAALAVLLILSAFFSLSETSMMAINRYRLKHLAKEGHRGARLTSQLLLNTDRLL
CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GVILLGNNLLNAAAATLVAVIVSIFFGHSDAALFIGTVGVTFAILVFSEITPKVVAAAYP
EEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCH
ERIALASSYVLTPLLKVFSPVVWFINLFVKALLILLRLKPQNEDLTQKISLEELKTLVLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHH
AGHFIRQKHQSMLLNLFDLENVTVDDVMVPRGQIEAIDLEDDDESIRDQLLTCYHTRLPV
HHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCH
YRGAMDNVTGIIHVRKVLNQMRSENITAVTLEKIMREPYFIPSGTPLFSQLQLFQENRER
HHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCHHH
VGLIVDEYGEWMGLVTLEDIVEEIIGEFTTHAPSQAGNFLKQEDGSVIVEGSNLLRDLNR
HCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCEEEECHHHHHHHHH
KLGWNLPLGGPKTLNGLILEYFQDIPEAGTSVKIAGYPMEIIQTQDRVVKVVRIFPPLAP
HCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
IEEKLPDSYAES
HHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]