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The map label for this gene is yacF [C]

Identifier: 82703248

GI number: 82703248

Start: 2423358

End: 2424155

Strand: Reverse

Name: yacF [C]

Synonym: Nmul_A2129

Alternate gene names: 82703248

Gene position: 2424155-2423358 (Counterclockwise)

Preceding gene: 82703249

Following gene: 82703246

Centisome position: 76.13

GC content: 55.76

Gene sequence:

>798_bases
ATGCCCATCCGCAGTCGCCGTTCTTTGCTGTGGGCCTCTATCGTGATCCGTTACGAACATCCTCTCAACGAACGCGTCCG
CACGCTTCTGCGCCTTGAGGACTTGTTTGACAAGGTAGCGTTCTTTTCTGCGCAGGAAGAGCCCTATGATCACCACGCTG
CGCTTGTCACCCTGTTCGAGATTCTCGACGTGACAGGCCGCGCCGACATGAAGTCGGAACTGCTGCAGGAATTGGATCGG
CAGAAGCAGGCGCTGGAATTGTTGCGTAAAAGCCCGGAGAACCCGGAAGGCGGACTGGACGAGATGCTGAATGACATTCA
GATCTCCTCCCAGGATTTGCGGACCGTTGCCGGAAAAATCGGAGAACCCATGCGCGACAACGAGTGGCTGATGGGCATCA
AGCAGCGCGTCGGCATACCCGGAGGGGCATGCGAATTCGATCTGCCTTCATATCGCTACTGGCTGCATCTCGACCCCGAA
GTGCGGCGAAGCGACCTCGATGAATGGATCGCGACGCTGCTCCCAATCGAGAAAAGTTTCCGTATCCTTTTGCGTCTGCT
GCGGGACAGCGGAAAAACCGACAACTACACCGCTAACAAGGGCATGTTCCAGCAGATGGGAGCGGGGAGGATGGCGCACC
TGCTATCCCTCAAGCTGGATGAAAGCATGGCCTGCGTTCCCGAGATCAGTGCGCACAAATTTGCTCTGACCATTCGCTTC
GTTGTTTCCAGTTCCACACAGAAAACCCGGCTATACGAAGAAGACGTGGAGTTCGAACTGACTTCCTGCACTTTTTAG

Upstream 100 bases:

>100_bases
TGGCCCAGGGAAGTTGATTTCAACGCACCAGGCGGGTTTCCTGCAGGAGCTTCACATTTGTTGCCTGCGGATTTGGCTGC
TAAAATAAGAATTTGAAACA

Downstream 100 bases:

>100_bases
GAGAAATGGACTCCCTATCCGTTTCTTCATTTTGCAGGCGGGTTATTGTTCGCGCCGCTTTCCTGTCAGGGGACGCGTCC
TTCTAGGCGAGTCTTCCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MPIRSRRSLLWASIVIRYEHPLNERVRTLLRLEDLFDKVAFFSAQEEPYDHHAALVTLFEILDVTGRADMKSELLQELDR
QKQALELLRKSPENPEGGLDEMLNDIQISSQDLRTVAGKIGEPMRDNEWLMGIKQRVGIPGGACEFDLPSYRYWLHLDPE
VRRSDLDEWIATLLPIEKSFRILLRLLRDSGKTDNYTANKGMFQQMGAGRMAHLLSLKLDESMACVPEISAHKFALTIRF
VVSSSTQKTRLYEEDVEFELTSCTF

Sequences:

>Translated_265_residues
MPIRSRRSLLWASIVIRYEHPLNERVRTLLRLEDLFDKVAFFSAQEEPYDHHAALVTLFEILDVTGRADMKSELLQELDR
QKQALELLRKSPENPEGGLDEMLNDIQISSQDLRTVAGKIGEPMRDNEWLMGIKQRVGIPGGACEFDLPSYRYWLHLDPE
VRRSDLDEWIATLLPIEKSFRILLRLLRDSGKTDNYTANKGMFQQMGAGRMAHLLSLKLDESMACVPEISAHKFALTIRF
VVSSSTQKTRLYEEDVEFELTSCTF
>Mature_264_residues
PIRSRRSLLWASIVIRYEHPLNERVRTLLRLEDLFDKVAFFSAQEEPYDHHAALVTLFEILDVTGRADMKSELLQELDRQ
KQALELLRKSPENPEGGLDEMLNDIQISSQDLRTVAGKIGEPMRDNEWLMGIKQRVGIPGGACEFDLPSYRYWLHLDPEV
RRSDLDEWIATLLPIEKSFRILLRLLRDSGKTDNYTANKGMFQQMGAGRMAHLLSLKLDESMACVPEISAHKFALTIRFV
VSSSTQKTRLYEEDVEFELTSCTF

Specific function: Unknown

COG id: COG4582

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0289 family [H]

Homologues:

Organism=Escherichia coli, GI1786291, Length=252, Percent_Identity=33.3333333333333, Blast_Score=139, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009777 [H]

Pfam domain/function: PF07072 DUF1342 [H]

EC number: NA

Molecular weight: Translated: 30560; Mature: 30429

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIRSRRSLLWASIVIRYEHPLNERVRTLLRLEDLFDKVAFFSAQEEPYDHHAALVTLFE
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ILDVTGRADMKSELLQELDRQKQALELLRKSPENPEGGLDEMLNDIQISSQDLRTVAGKI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH
GEPMRDNEWLMGIKQRVGIPGGACEFDLPSYRYWLHLDPEVRRSDLDEWIATLLPIEKSF
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCHHHHH
RILLRLLRDSGKTDNYTANKGMFQQMGAGRMAHLLSLKLDESMACVPEISAHKFALTIRF
HHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEE
VVSSSTQKTRLYEEDVEFELTSCTF
EECCCCHHHHHHHHCCCEEEECCCC
>Mature Secondary Structure 
PIRSRRSLLWASIVIRYEHPLNERVRTLLRLEDLFDKVAFFSAQEEPYDHHAALVTLFE
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ILDVTGRADMKSELLQELDRQKQALELLRKSPENPEGGLDEMLNDIQISSQDLRTVAGKI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH
GEPMRDNEWLMGIKQRVGIPGGACEFDLPSYRYWLHLDPEVRRSDLDEWIATLLPIEKSF
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCHHHHH
RILLRLLRDSGKTDNYTANKGMFQQMGAGRMAHLLSLKLDESMACVPEISAHKFALTIRF
HHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEE
VVSSSTQKTRLYEEDVEFELTSCTF
EECCCCHHHHHHHHCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12700255 [H]