| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is trxA [H]
Identifier: 82703204
GI number: 82703204
Start: 2377495
End: 2377818
Strand: Direct
Name: trxA [H]
Synonym: Nmul_A2084
Alternate gene names: 82703204
Gene position: 2377495-2377818 (Clockwise)
Preceding gene: 162139861
Following gene: 82703205
Centisome position: 74.66
GC content: 47.84
Gene sequence:
>324_bases ATGAGTCATACCCACCATATTTCTGACGGAAATTTTGAGACTGAAGTATTGCAGTCGACAGTCCCTGTACTGGTTGACTA TTGGGCAGAATGGTGTGGACCATGCAAGATGATAGCGCCCATCCTGGACGAGGTAGCCAAGGAATATGGCGACCGCCTCA AGGTTGCCAAGCTCAATATCGACGAAAACCAGGCTACGCCCCCCAAATATGGTATTCGCGGTATCCCTACTCTCATGCTC TTCAAAAACGGAAATATCGAAGCCACCAAAGTAGGGGCGTTATCGAAATCCCAGCTCACTGCTTTTATTGACAGTCACAT CTAA
Upstream 100 bases:
>100_bases TTCTGGTATCAATGGCAGGTGTCATTAATAGAGACCTGCCCTTGCAGAATTAACTGAATGTCAGTCGTACACATTTCATT TAAGCGATTTGGAAAAGCAC
Downstream 100 bases:
>100_bases AACTGCTAAGTTATAATTAACGCATTCCGCAAGCTCTCCGGTAGTTTCCGGTTCGATTACGTTCGCCGCTTCGAATTCTC GTTCGGCTCCATCGGTTTTC
Product: thioredoxin
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSHTHHISDGNFETEVLQSTVPVLVDYWAEWCGPCKMIAPILDEVAKEYGDRLKVAKLNIDENQATPPKYGIRGIPTLML FKNGNIEATKVGALSKSQLTAFIDSHI
Sequences:
>Translated_107_residues MSHTHHISDGNFETEVLQSTVPVLVDYWAEWCGPCKMIAPILDEVAKEYGDRLKVAKLNIDENQATPPKYGIRGIPTLML FKNGNIEATKVGALSKSQLTAFIDSHI >Mature_106_residues SHTHHISDGNFETEVLQSTVPVLVDYWAEWCGPCKMIAPILDEVAKEYGDRLKVAKLNIDENQATPPKYGIRGIPTLMLF KNGNIEATKVGALSKSQLTAFIDSHI
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=106, Percent_Identity=38.6792452830189, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI87082331, Length=102, Percent_Identity=66.6666666666667, Blast_Score=154, Evalue=8e-40, Organism=Escherichia coli, GI1788936, Length=93, Percent_Identity=35.4838709677419, Blast_Score=87, Evalue=2e-19, Organism=Escherichia coli, GI87081747, Length=81, Percent_Identity=37.037037037037, Blast_Score=66, Evalue=5e-13, Organism=Caenorhabditis elegans, GI212646193, Length=114, Percent_Identity=36.8421052631579, Blast_Score=83, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17554386, Length=81, Percent_Identity=43.2098765432099, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17556044, Length=103, Percent_Identity=32.0388349514563, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71998175, Length=71, Percent_Identity=42.2535211267606, Blast_Score=68, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17509965, Length=67, Percent_Identity=40.2985074626866, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115532378, Length=79, Percent_Identity=39.2405063291139, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI115532380, Length=79, Percent_Identity=39.2405063291139, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17544108, Length=79, Percent_Identity=39.2405063291139, Blast_Score=62, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6323072, Length=90, Percent_Identity=38.8888888888889, Blast_Score=71, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6321648, Length=104, Percent_Identity=32.6923076923077, Blast_Score=67, Evalue=4e-13, Organism=Drosophila melanogaster, GI24639826, Length=84, Percent_Identity=42.8571428571429, Blast_Score=86, Evalue=4e-18, Organism=Drosophila melanogaster, GI28573567, Length=93, Percent_Identity=34.4086021505376, Blast_Score=72, Evalue=6e-14, Organism=Drosophila melanogaster, GI24664269, Length=74, Percent_Identity=39.1891891891892, Blast_Score=69, Evalue=5e-13, Organism=Drosophila melanogaster, GI17648013, Length=62, Percent_Identity=41.9354838709677, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI24583090, Length=62, Percent_Identity=41.9354838709677, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 11869; Mature: 11738
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTHHISDGNFETEVLQSTVPVLVDYWAEWCGPCKMIAPILDEVAKEYGDRLKVAKLNI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECC DENQATPPKYGIRGIPTLMLFKNGNIEATKVGALSKSQLTAFIDSHI CCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHCCC >Mature Secondary Structure SHTHHISDGNFETEVLQSTVPVLVDYWAEWCGPCKMIAPILDEVAKEYGDRLKVAKLNI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECC DENQATPPKYGIRGIPTLMLFKNGNIEATKVGALSKSQLTAFIDSHI CCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10224002; 10984043 [H]