| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
Click here to switch to the map view.
The map label for this gene is pgl [H]
Identifier: 78779163
GI number: 78779163
Start: 727822
End: 728559
Strand: Direct
Name: pgl [H]
Synonym: PMT9312_0779
Alternate gene names: 78779163
Gene position: 727822-728559 (Clockwise)
Preceding gene: 78779162
Following gene: 78779164
Centisome position: 42.58
GC content: 29.13
Gene sequence:
>738_bases ATGGATGAAATGATTGAAAAGGTTAAAAATGGTTATAACCTAAACATTTACAAAGACAAGTTAGAGCTATCAACAGCTGT TTTTAAATTTATTGAAAGTCACATTATTCATACTTTAAAAAAGAAATGCAGATTCAAATTCTGTGTGAGTGGAGGTTCAA CTCCTAAATCTGTTTATCAGCTTCTATCAATAAGTGATCTTAGATGGGATATGGTTGATGTCTTTTTAGGAGATGAAAGG TGTGTTGATCCAAATTCAGAATTAAGTAACTCGTTAATGTTGAAAAAATCATTATTAACTAATTTTGGATCTAAAGCTTT TTTTTATGAGATTTTTAATGATTTAAAGGCTGATGATGAAGCGACAAAAAATCAATTTATTTCTAAATTATTTGAAAAAT GCGGATCAAACCCTCCAACCTTTGATTTAACATTATTAGGTCTTGGAGACGATGGTCATACAGCTTCACTATTCCCTTAT CAAAAAAATAATAACGCAGATGATTTTGTGATTTTTAATGAAGGTAAAGGATTAAAAAGAATTTCATTAACTCCAAAGGT TCTTTCAGCCTCTTCGAAGATAGTATTTTTGGTTAGTGGAGCTTCTAAAAGAATTGCTCTTGAGAGGTTATTAGATGAAA AAGAGCCATCAGATAGAACACCATCAAAATTAATAAAATCTATTAATCAAATTTCAATATTTTGTGATCAGGAATCAGCA AAAGAATTAGAAATTTAG
Upstream 100 bases:
>100_bases GAACCAATAGACTTCCTCAGAATCTTGTTCAGGCAATGAGAGACTGTTTTGGCTCTCACACATATCAAAGAATTGATAAG GAAGGTAGTTTTCATACTGA
Downstream 100 bases:
>100_bases TTAAAGTCTAATAATAATTAAAAGTATTTAATGAATAAGAAAAAAATTTTATTCCAGAAAAAGGAGTTCGATGGTTGGGA AACATTAAATGATACTGTTA
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MDEMIEKVKNGYNLNIYKDKLELSTAVFKFIESHIIHTLKKKCRFKFCVSGGSTPKSVYQLLSISDLRWDMVDVFLGDER CVDPNSELSNSLMLKKSLLTNFGSKAFFYEIFNDLKADDEATKNQFISKLFEKCGSNPPTFDLTLLGLGDDGHTASLFPY QKNNNADDFVIFNEGKGLKRISLTPKVLSASSKIVFLVSGASKRIALERLLDEKEPSDRTPSKLIKSINQISIFCDQESA KELEI
Sequences:
>Translated_245_residues MDEMIEKVKNGYNLNIYKDKLELSTAVFKFIESHIIHTLKKKCRFKFCVSGGSTPKSVYQLLSISDLRWDMVDVFLGDER CVDPNSELSNSLMLKKSLLTNFGSKAFFYEIFNDLKADDEATKNQFISKLFEKCGSNPPTFDLTLLGLGDDGHTASLFPY QKNNNADDFVIFNEGKGLKRISLTPKVLSASSKIVFLVSGASKRIALERLLDEKEPSDRTPSKLIKSINQISIFCDQESA KELEI >Mature_245_residues MDEMIEKVKNGYNLNIYKDKLELSTAVFKFIESHIIHTLKKKCRFKFCVSGGSTPKSVYQLLSISDLRWDMVDVFLGDER CVDPNSELSNSLMLKKSLLTNFGSKAFFYEIFNDLKADDEATKNQFISKLFEKCGSNPPTFDLTLLGLGDDGHTASLFPY QKNNNADDFVIFNEGKGLKRISLTPKVLSASSKIVFLVSGASKRIALERLLDEKEPSDRTPSKLIKSINQISIFCDQESA KELEI
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=194, Percent_Identity=28.3505154639175, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI115533058, Length=237, Percent_Identity=25.3164556962025, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI115533060, Length=237, Percent_Identity=25.3164556962025, Blast_Score=74, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6324362, Length=215, Percent_Identity=29.3023255813954, Blast_Score=80, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6319918, Length=212, Percent_Identity=28.7735849056604, Blast_Score=78, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6321957, Length=243, Percent_Identity=27.1604938271605, Blast_Score=76, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6321687, Length=219, Percent_Identity=31.0502283105023, Blast_Score=73, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 27647; Mature: 27647
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEMIEKVKNGYNLNIYKDKLELSTAVFKFIESHIIHTLKKKCRFKFCVSGGSTPKSVYQ CHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHH LLSISDLRWDMVDVFLGDERCVDPNSELSNSLMLKKSLLTNFGSKAFFYEIFNDLKADDE HHHHCCCHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH ATKNQFISKLFEKCGSNPPTFDLTLLGLGDDGHTASLFPYQKNNNADDFVIFNEGKGLKR HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCEE ISLTPKVLSASSKIVFLVSGASKRIALERLLDEKEPSDRTPSKLIKSINQISIFCDQESA EECCHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEECCCCC KELEI CCCCC >Mature Secondary Structure MDEMIEKVKNGYNLNIYKDKLELSTAVFKFIESHIIHTLKKKCRFKFCVSGGSTPKSVYQ CHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHH LLSISDLRWDMVDVFLGDERCVDPNSELSNSLMLKKSLLTNFGSKAFFYEIFNDLKADDE HHHHCCCHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH ATKNQFISKLFEKCGSNPPTFDLTLLGLGDDGHTASLFPYQKNNNADDFVIFNEGKGLKR HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCEE ISLTPKVLSASSKIVFLVSGASKRIALERLLDEKEPSDRTPSKLIKSINQISIFCDQESA EECCHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEECCCCC KELEI CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]