Click here to switch to the map view.

The map label for this gene is 78779049

Identifier: 78779049

GI number: 78779049

Start: 627279

End: 627953

Strand: Direct

Name: 78779049

Synonym: PMT9312_0664

Alternate gene names: NA

Gene position: 627279-627953 (Clockwise)

Preceding gene: 78779048

Following gene: 78779052

Centisome position: 36.7

GC content: 29.93

Gene sequence:

>675_bases
TTGAATTCAAACAATAGTCAAAACAATAGTGAAAAAACACCTTATGAAATTTTAGGTGTAAAAGAAGGCTCTTCTTTTGA
AGAGATTCAGAAGGCTAGAGATATCAAAGTTAAAGAGGCTGGTGAAGATCTGATTTTAAAAGCAAAAATAGAGTCTTCCT
TTGATCAATTACTTATGGGTAGTTTGAAAGCAAGACAATCAGGGAATGTAAGTTATGCAGCTGAAAGTGCTTCAAAAAAG
GAAAAACAAATTAATCAATTTACCAATAATAATTTCCCACTTCTATCTAAAATAAAAAATCTAAATAATAATACTAACAA
CTCAGGTCAGTACAGTCTTCCTAAAATAACGCCCCCCTCCTTTGATAACCTCTCAATAAAATTATCCGCCGGGATATTAT
TTTTAATTTTGCTATTTATTAGCCCAGATTCTAATAATAGACTTTTACTTTCTATCTCAACATTAATACTTACTTATACT
CAAATTAAATCGGGGAAAAGATTTATAGGTTCTTTAGGATGGAGTGTTACTTTTCTTTCAATAGGATTAATATTCGGAGG
ATTACTTGAAACTAATTCTTTAATTCAAGAAATATCAAATAATTCTCTATCAATACAAAAAATTCAAAGTATTCCCGCCA
TGGTTATTTTATGGCTGGGCGTAATCTTCTTATGA

Upstream 100 bases:

>100_bases
AAACAAAGTTGCTCCTGTTGTTAGTGGAGTTGAGCCAATTGTTTTATAAAGCCTTAATGGATTATAAAATTGGTTAATCT
GTTAGTATTGGTAAAAAATT

Downstream 100 bases:

>100_bases
TTAACTTTCTATCATCAATCTAATCTCTTCATAATTTATCAAATATTTATTCTTACAAAATTCACATACCAACTCTGCTC
TACCATCTTTCTTTAAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MNSNNSQNNSEKTPYEILGVKEGSSFEEIQKARDIKVKEAGEDLILKAKIESSFDQLLMGSLKARQSGNVSYAAESASKK
EKQINQFTNNNFPLLSKIKNLNNNTNNSGQYSLPKITPPSFDNLSIKLSAGILFLILLFISPDSNNRLLLSISTLILTYT
QIKSGKRFIGSLGWSVTFLSIGLIFGGLLETNSLIQEISNNSLSIQKIQSIPAMVILWLGVIFL

Sequences:

>Translated_224_residues
MNSNNSQNNSEKTPYEILGVKEGSSFEEIQKARDIKVKEAGEDLILKAKIESSFDQLLMGSLKARQSGNVSYAAESASKK
EKQINQFTNNNFPLLSKIKNLNNNTNNSGQYSLPKITPPSFDNLSIKLSAGILFLILLFISPDSNNRLLLSISTLILTYT
QIKSGKRFIGSLGWSVTFLSIGLIFGGLLETNSLIQEISNNSLSIQKIQSIPAMVILWLGVIFL
>Mature_224_residues
MNSNNSQNNSEKTPYEILGVKEGSSFEEIQKARDIKVKEAGEDLILKAKIESSFDQLLMGSLKARQSGNVSYAAESASKK
EKQINQFTNNNFPLLSKIKNLNNNTNNSGQYSLPKITPPSFDNLSIKLSAGILFLILLFISPDSNNRLLLSISTLILTYT
QIKSGKRFIGSLGWSVTFLSIGLIFGGLLETNSLIQEISNNSLSIQKIQSIPAMVILWLGVIFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24692; Mature: 24692

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNNSQNNSEKTPYEILGVKEGSSFEEIQKARDIKVKEAGEDLILKAKIESSFDQLLMG
CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHH
SLKARQSGNVSYAAESASKKEKQINQFTNNNFPLLSKIKNLNNNTNNSGQYSLPKITPPS
HHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCC
FDNLSIKLSAGILFLILLFISPDSNNRLLLSISTLILTYTQIKSGKRFIGSLGWSVTFLS
CCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHCHHHHHHH
IGLIFGGLLETNSLIQEISNNSLSIQKIQSIPAMVILWLGVIFL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNSNNSQNNSEKTPYEILGVKEGSSFEEIQKARDIKVKEAGEDLILKAKIESSFDQLLMG
CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHH
SLKARQSGNVSYAAESASKKEKQINQFTNNNFPLLSKIKNLNNNTNNSGQYSLPKITPPS
HHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCC
FDNLSIKLSAGILFLILLFISPDSNNRLLLSISTLILTYTQIKSGKRFIGSLGWSVTFLS
CCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHCHHHHHHH
IGLIFGGLLETNSLIQEISNNSLSIQKIQSIPAMVILWLGVIFL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA