| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78779052
Identifier: 78779052
GI number: 78779052
Start: 629577
End: 630020
Strand: Direct
Name: 78779052
Synonym: PMT9312_0667
Alternate gene names: NA
Gene position: 629577-630020 (Clockwise)
Preceding gene: 78779049
Following gene: 78779053
Centisome position: 36.83
GC content: 31.08
Gene sequence:
>444_bases ATGAATATTATTTTTAGGGAAGTTGATCCTTTTAATTGTTGGATATGGATCAGGTTTTCAGAATCACCAACTCAAGATGA AAAAAATTATTTAGATGGTGTTTTTGATAGTTGGTACGTTTTAGGAAGGCTAGGTGGATTTAATTCTGAAAATTTGCAAA CTCATGAAGAGGGTTCCGATCTAAGTTGGATGTCCTACGATAATGACCAAAAAAACGCATCTCTTCCAGCCTTAATGCAT AATTTAGGAATTATGGAATATCAAAACCTGTGGGGAAGGTGTTGGGTTGATTTTGGAACTTCAGACTCCATTTCAATAGA TATATTAATTAATTCATTGAATGAGATATCAAATAATTATGTAAAAATTGAAGAGTTAATTATTGGCGGTGAAAATAATG ATTGGTCAATTGAAGAACATGAAGATTTAGTTTTCAAAGATTAA
Upstream 100 bases:
>100_bases TCTTGTAAATCAAGCATTATTAATTAAGTTATAGGTATGAATTTTAATCTAGTAATAACTTACTTATAATAGCTTTAGAT CTAAAAAGCTATTAGTCAAT
Downstream 100 bases:
>100_bases GTGTTTTAGATGGAAGATTTAACAAGATTAATTATTTCCCATGAAAGAATTGAAAATATTAAGAACAATAATTTAGAACT TTCTAAAGAAGAGGCTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MNIIFREVDPFNCWIWIRFSESPTQDEKNYLDGVFDSWYVLGRLGGFNSENLQTHEEGSDLSWMSYDNDQKNASLPALMH NLGIMEYQNLWGRCWVDFGTSDSISIDILINSLNEISNNYVKIEELIIGGENNDWSIEEHEDLVFKD
Sequences:
>Translated_147_residues MNIIFREVDPFNCWIWIRFSESPTQDEKNYLDGVFDSWYVLGRLGGFNSENLQTHEEGSDLSWMSYDNDQKNASLPALMH NLGIMEYQNLWGRCWVDFGTSDSISIDILINSLNEISNNYVKIEELIIGGENNDWSIEEHEDLVFKD >Mature_147_residues MNIIFREVDPFNCWIWIRFSESPTQDEKNYLDGVFDSWYVLGRLGGFNSENLQTHEEGSDLSWMSYDNDQKNASLPALMH NLGIMEYQNLWGRCWVDFGTSDSISIDILINSLNEISNNYVKIEELIIGGENNDWSIEEHEDLVFKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17152; Mature: 17152
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIIFREVDPFNCWIWIRFSESPTQDEKNYLDGVFDSWYVLGRLGGFNSENLQTHEEGSD CCEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHEEHHCCCCCCCCCCCCCCCCC LSWMSYDNDQKNASLPALMHNLGIMEYQNLWGRCWVDFGTSDSISIDILINSLNEISNNY EEEEECCCCCCCCCHHHHHHHCCCHHHHCCCEEEEEECCCCCCEEEEEEEECHHHHCCCE VKIEELIIGGENNDWSIEEHEDLVFKD EEEEEEEECCCCCCCCCCCCCCEEECC >Mature Secondary Structure MNIIFREVDPFNCWIWIRFSESPTQDEKNYLDGVFDSWYVLGRLGGFNSENLQTHEEGSD CCEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHEEHHCCCCCCCCCCCCCCCCC LSWMSYDNDQKNASLPALMHNLGIMEYQNLWGRCWVDFGTSDSISIDILINSLNEISNNY EEEEECCCCCCCCCHHHHHHHCCCHHHHCCCEEEEEECCCCCCEEEEEEEECHHHHCCCE VKIEELIIGGENNDWSIEEHEDLVFKD EEEEEEEECCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA