| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78779044
Identifier: 78779044
GI number: 78779044
Start: 619565
End: 620311
Strand: Reverse
Name: 78779044
Synonym: PMT9312_0659
Alternate gene names: NA
Gene position: 620311-619565 (Counterclockwise)
Preceding gene: 78779045
Following gene: 78779043
Centisome position: 36.29
GC content: 27.31
Gene sequence:
>747_bases ATGTCAAAAAAAATGTCAACTAAAATGTCAAATAAAGGTGAGATAATTACAGAAGATAGAATTGGTTTCGAAAAGTCAAA TAAAGCATTAGGTTTTCTTTATAAGGAATGGTATGAACTCATTTCAAAGTTTCTTTCTAAAATAGATGGAATTAATATTG AATTGGGATGCGGTCCAAGTTTTATAGATCAGATAAATAAAAGCATAAAAAAAACAGATGTTTTTTTAAATTCCAATACT GATTTCAAGCTTAATGCAATGGATATAGGAAAAAAATTTGAAAACAAAATATCAAATTTAATCTTAGTTAATGTTTTTCA TCACATAAGCGACCCAGAATTATTTTTGAAATCAGCAGAAAAATCTCTTTTATCTGGAGGAAGAATAATAATGATTGAAC CAAGCAATAATTACTGGAGTAGATTGGTCTATAAACTCATAGCACACGAACCCTTTGATACAAGACAAATTGATTGGAAA TTTGAATCCAAAGATCCACTATTAGACTCAAATCAAGCACTCTCATGGATTATTTTTGAGAGGGATTATGAAAAATTCAG AAATTTATTCCCAATGTTTTCTCTAATTCAAAAAAAGAATATGATGCCATTTTCTTATTTATTGAGCGGAGGGCACTCTT TCAATACGAGAATTGGTAATTTAATTAGAATGACAAGAAATCTTGAAAAATTATTCTTTGATAAATATTTGGGGATATTC AATTTAATATGTCTAGAAAAAATTTAA
Upstream 100 bases:
>100_bases CCAAAGATTAATTTATTAAATCTTTAAATTGAATTTAAAAGCAGTTTATAAATTATGTTTTAATTCAAATTCGTGAATAA TATTTCCAAAGTCAAATAAA
Downstream 100 bases:
>100_bases ATTTCAAATCAACAATATTTAAAATTTCTATTTTTTATGTAACCATCTATTTATTTGCTCTTTTTCTTAGATATAGCAAT GGCTTAGAAAATTTAGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase Type
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSKKMSTKMSNKGEIITEDRIGFEKSNKALGFLYKEWYELISKFLSKIDGINIELGCGPSFIDQINKSIKKTDVFLNSNT DFKLNAMDIGKKFENKISNLILVNVFHHISDPELFLKSAEKSLLSGGRIIMIEPSNNYWSRLVYKLIAHEPFDTRQIDWK FESKDPLLDSNQALSWIIFERDYEKFRNLFPMFSLIQKKNMMPFSYLLSGGHSFNTRIGNLIRMTRNLEKLFFDKYLGIF NLICLEKI
Sequences:
>Translated_248_residues MSKKMSTKMSNKGEIITEDRIGFEKSNKALGFLYKEWYELISKFLSKIDGINIELGCGPSFIDQINKSIKKTDVFLNSNT DFKLNAMDIGKKFENKISNLILVNVFHHISDPELFLKSAEKSLLSGGRIIMIEPSNNYWSRLVYKLIAHEPFDTRQIDWK FESKDPLLDSNQALSWIIFERDYEKFRNLFPMFSLIQKKNMMPFSYLLSGGHSFNTRIGNLIRMTRNLEKLFFDKYLGIF NLICLEKI >Mature_247_residues SKKMSTKMSNKGEIITEDRIGFEKSNKALGFLYKEWYELISKFLSKIDGINIELGCGPSFIDQINKSIKKTDVFLNSNTD FKLNAMDIGKKFENKISNLILVNVFHHISDPELFLKSAEKSLLSGGRIIMIEPSNNYWSRLVYKLIAHEPFDTRQIDWKF ESKDPLLDSNQALSWIIFERDYEKFRNLFPMFSLIQKKNMMPFSYLLSGGHSFNTRIGNLIRMTRNLEKLFFDKYLGIFN LICLEKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29001; Mature: 28870
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKMSTKMSNKGEIITEDRIGFEKSNKALGFLYKEWYELISKFLSKIDGINIELGCGPS CCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHH FIDQINKSIKKTDVFLNSNTDFKLNAMDIGKKFENKISNLILVNVFHHISDPELFLKSAE HHHHHHHHHHHHHEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KSLLSGGRIIMIEPSNNYWSRLVYKLIAHEPFDTRQIDWKFESKDPLLDSNQALSWIIFE HHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEH RDYEKFRNLFPMFSLIQKKNMMPFSYLLSGGHSFNTRIGNLIRMTRNLEKLFFDKYLGIF HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NLICLEKI HHHHHHCC >Mature Secondary Structure SKKMSTKMSNKGEIITEDRIGFEKSNKALGFLYKEWYELISKFLSKIDGINIELGCGPS CCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHH FIDQINKSIKKTDVFLNSNTDFKLNAMDIGKKFENKISNLILVNVFHHISDPELFLKSAE HHHHHHHHHHHHHEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KSLLSGGRIIMIEPSNNYWSRLVYKLIAHEPFDTRQIDWKFESKDPLLDSNQALSWIIFE HHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEH RDYEKFRNLFPMFSLIQKKNMMPFSYLLSGGHSFNTRIGNLIRMTRNLEKLFFDKYLGIF HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NLICLEKI HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA